Paludibacter propionicigenes: Palpr_1247
Help
Entry
Palpr_1247 CDS
T01362
Name
(GenBank) cysteine desulfurase, SufS subfamily
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn00450
Selenocompound metabolism
ppn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Palpr_1247
Enzymes [BR:
ppn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
Palpr_1247
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
Palpr_1247
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADQ79394
UniProt:
E4T3V0
LinkDB
All DBs
Position
1499107..1500330
Genome browser
AA seq
407 aa
AA seq
DB search
MDKEQIQHIRADFPILTEKIYGKELIYFDNGATTQKPRCVVEKMENGYYHLNANIHRGVH
YLSQKATEAHEAARVTVAEFLHAGKHEEIIFTRGTTEAINLVATSFGEAFCNAGDEIIVS
VMEHHSNIVPWQMLCERKGLKLKVIPMNECGELNIEAFKALLNERTKIVSVAHVSNVLGT
INPVKEIIRIAHEKNVPVLIDGAQAVPHIPVNVVELDADFYVFSAHKIYGPTGIGVLYGK
SDLLNAIPPYQGGGEMIATVSFEKTTYNELPFKFEAGTPDYIGSTALAEAIRYVDNIGLD
KIAEHEHELLTYGTKRLLEIDGMRIIGTAKDKSSVISFLVGNIHPYDIGMLLDKLGIAVR
TGHHCAQPLIDSLEIPGTVRASFAFYNTKEEIDTFVEALKRVVTMLS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggataaagaacaaatacaacatatacgggctgattttcctattttaacagaaaaaatc
tacggaaaggagttgatttattttgataacggtgccaccacccaaaaaccacgatgcgta
gttgaaaagatggaaaacgggtactaccatttaaatgccaatatacaccgaggcgtacat
tatctgagccaaaaagcaactgaagcccacgaagctgcacgagttactgtggctgaattt
ctacacgccggcaaacacgaagaaatcatttttacacgcggcaccaccgaagccattaat
ttggtagctacgtcgtttggtgaagcattttgtaacgctggtgacgaaataatagtgtcg
gtcatggagcaccattccaacattgttccctggcaaatgctctgcgagcgaaaaggtttg
aagcttaaagtgatacccatgaacgaatgcggcgagctgaacattgaagcgttcaaagca
ttgcttaacgaacgaacaaaaattgtgtcggtagctcacgtttcaaatgtattgggcact
atcaatcccgtcaaagaaatcatccgcatcgctcacgaaaaaaatgttccggttcttata
gacggtgctcaagccgttccgcacattccggtaaatgtagtggagctcgacgctgatttc
tacgtattttctgctcataaaatttacggacctaccggcattggtgttctttacggaaag
tccgacctgctgaatgcaattccaccttaccaaggcggcggcgaaatgatagcaactgtt
tcttttgagaaaaccacctacaacgaacttccgtttaaatttgaagccggaactccggac
tatattggttctacggctttggctgaagctatcaggtatgttgataatattggcttagat
aaaattgccgaacacgaacatgagctgctcacctacggcacaaaacgcttgttggaaata
gacggaatgcgaattatcggaacggcaaaggataaaagttcggttatttcatttctggta
ggcaacattcacccatacgacattggcatgttactggataaactcggaattgcagttcgt
accggtcaccactgcgcgcaacctcttatcgattcgctcgaaattccgggaacggtgcgg
gcgtcatttgcgttctacaatacaaaagaagaaattgacacattcgtagaggcgctgaaa
cgcgtggttaccatgttaagctga
DBGET
integrated database retrieval system
