Paludibacter propionicigenes: Palpr_1249
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Entry
Palpr_1249 CDS
T01362
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Palpr_1249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_1249
Enzymes [BR:
ppn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Palpr_1249
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Palpr_1249
RecFOR pathway proteins
Palpr_1249
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
ADQ79396
UniProt:
E4T3V2
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All DBs
Position
complement(1500883..1501479)
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AA seq
198 aa
AA seq
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MIKEHIILGIDPGTTIMGYGILKVSGNKTEMLAMGVLDLKKYSNHYLKLQRVFARTLSLI
DEFHPDHLAIEAPFFGKNVQSMLKLGRAQGVAMSAALYRDVPITEYAPLKIKMAITGSGS
ASKEQVADMLRRYLKIPQESMLPQLDATDGLAAAYCHFLQLGKPTSEKAYSGWKDFIAKN
EGKVKTPKKIIPDPTPEL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagaacacattatattaggcattgatcccggaacaaccatcatggggtacggc
atactgaaggtttcggggaataaaaccgagatgctggccatgggcgttttagatctgaag
aaatactccaatcattacctgaaactgcagcgggtttttgcccgcacgttgtccttgata
gatgaatttcatccggatcatttagctatcgaggctccatttttcggaaagaatgtgcag
tctatgcttaagcttggtcgtgctcagggcgttgccatgtcggcagcattgtatcgcgat
gttccgataactgagtatgctccgctgaaaattaaaatggctattacgggtagtggtagt
gcttccaaagagcaagttgccgatatgttgaggcgctatttgaaaatccctcaggagagc
atgcttccgcagctggatgcaactgatggattggccgcggcatactgtcattttttacag
ttgggaaaaccaacttcggaaaaagcgtattcagggtggaaagattttattgccaaaaac
gaaggaaaggtaaaaactccgaagaagattattcccgatccgactccggaattgtaa
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