Paludibacter propionicigenes: Palpr_1254
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Entry
Palpr_1254 CDS
T01362
Name
(GenBank) DNA replication and repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppn
Paludibacter propionicigenes
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_1254
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Palpr_1254
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
Lon_C
DnaB_C
AAA
AAA_22
AAA_24
AAA_16
nSTAND3
NTPase_1
CobU
AAA_14
AAA_5
DUF7129
NACHT
SLFN-g3_helicase
divDNAB
ATPase_2
zf-RING_10
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ADQ79401
UniProt:
E4T3V7
LinkDB
All DBs
Position
complement(1503976..1505346)
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AA seq
456 aa
AA seq
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MAKTKSVYVCQNCGVDSPKWIGKCPSCGEWNTYVEEVVSKDNTPKVVMGGLEITKQKPIL
ITEVETSEESRFDTSCNELNRVLGGGLVPGSLVLIGGEPGIGKSTLVLQVVLNMKGKRTL
YVSGEESVKQLKLRAERLKFENPDCYIVSETSLEQIFVHVQNIQPDVLIVDSIQTISTEM
IESSPGSVSQVRECAAHLLKFSKTTSIPVLLIGHINKEGSIAGPKVLEHIVDTVLQFEGD
QHYMYRILRSIKNRFGSTSELGIFEMQQSGLREVSNPSELLLSQNHEGLSGVAIASAIEG
VRPFLIETQALVSSAAYGTPQRSSTGFDLRRLNMLLAVLEKRAGFKIAQKDVFLNIAGGI
KVNDPAIDLAVISAILSSNVDIAIEKHVCVAGEVGLSGEIRPINRIEQRILEAEKLGFKK
MIIPEYNLKSLNLNKLNIELIQVKKVEEAFRVLFKR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaactaaatctgtatatgtttgtcaaaattgtggcgtcgattcgccgaaatgg
ataggcaaatgtccatcgtgtggcgagtggaacacctatgtagaagaagtagtcagtaaa
gacaatacgcccaaagtagtgatgggcggactcgaaattaccaaacaaaaacctattctg
attacagaagtggaaacctcggaagagagccgtttcgataccagttgcaacgagttgaat
cgggtgttgggcggcggattggttccgggctcgctggtgctgattggtggcgagccgggt
atcggcaagtctacgctggtgctacaggtggtgctcaatatgaaaggaaaacgtacactc
tacgtgtccggcgaggaaagcgtaaaacagctgaaactccgtgccgagcgcctgaagttt
gagaatcccgactgctacattgtcagcgaaacttcgctcgaacaaatctttgtacatgtt
caaaacattcagcccgatgtgcttattgtcgattccattcagactatttctaccgaaatg
atagagtcgtcgcccgggtctgtgtcgcaggtgcgggagtgtgcggctcatcttctcaaa
ttcagtaaaacaacttccattccggtgttgctcatcggtcatatcaacaaagaaggcagc
attgccggtccgaaagtgttggagcatatcgtggacacggtgctccagttcgaaggcgac
cagcattatatgtaccgcatcctgcgttccatcaaaaaccgctttggaagtacgtccgaa
ctcggtattttcgaaatgcagcaaagcggtttgcgcgaagtaagcaatccgtcggaactg
ctgctttcgcaaaaccacgagggattaagcggcgtagccattgcttcggctattgaaggc
gtccgtcctttcctgatagaaacgcaggcgttggtcagctcagcggcttacggcacccct
caacgctcgagcactggctttgatctgcgccgactgaacatgttgctggccgtgctcgaa
aagcgcgccggattcaaaattgcccaaaaggatgtgtttctcaacattgccggtggcata
aaagtaaacgacccggccattgacctggcggttatatcggccatcttgtcgtccaacgtg
gatatagctatcgaaaagcacgtatgtgtggccggtgaagtaggactttcaggtgaaatt
cgccccatcaaccgcatagaacagcgcatactcgaagccgaaaagcttggattcaaaaaa
atgattatccccgaatacaacctgaaaagtctcaacctcaacaagctcaatatcgaactg
atacaggtaaagaaagtggaagaggcgttcagggtgttgtttaagagataa
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