Paludibacter propionicigenes: Palpr_1794
Help
Entry
Palpr_1794 CDS
T01362
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn03030
DNA replication
ppn03430
Mismatch repair
ppn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Palpr_1794
03430 Mismatch repair
Palpr_1794
03440 Homologous recombination
Palpr_1794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppn03032
]
Palpr_1794
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_1794
Enzymes [BR:
ppn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Palpr_1794
DNA replication proteins [BR:
ppn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Palpr_1794
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Palpr_1794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ADQ79933
UniProt:
E4T5D9
LinkDB
All DBs
Position
complement(2159640..2160407)
Genome browser
AA seq
255 aa
AA seq
DB search
MKLQLKNPIVFFDLETTGTNIVTDRIVEIAYHKVSPNGREETKSIRINPEMHIPESSSAI
HGIYDADVADCPTFKAVAKEIVRDIEGCDLAGYNSNRFDIPLLAEELLRADIDIDLMKRK
FVDVQVVFHKMEQRTLGAAYKFYCDKDLVGAHGAEADTLATYEVLKAQLDRYPELKNDVD
FLAKFTTQSNNVDFAGRIVYDDKGEEIINFGKYKGQKVVDVLKNDMGYYGWMMNSDFSLH
TKKVLTNIKLRNFNK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccaactaaaaaatcctatagtcttttttgatctggaaaccaccggaactaac
attgtaacggaccgtattgtagaaatagcataccataaggtttcgcctaacgggcgtgaa
gagacaaagtcgatacgtataaatccggaaatgcacattcctgaatcttcttcggctatt
catggtatttatgatgctgatgttgccgattgtcctacatttaaggctgttgcaaaggag
attgtacgtgacattgaaggttgtgaccttgcgggatataactcgaacagatttgatatt
ccgctgttggcagaagagttgctacgtgccgatattgatattgatttgatgaaaagaaaa
tttgtagatgtgcaggtggtgtttcataaaatggagcaacgtacgctgggtgcagcttat
aaattctattgcgataaagatttggttggggctcatggagcggaagccgatacactggct
acgtacgaggtacttaaggcgcaattggatcgctatccggaacttaagaacgatgttgat
tttctggcaaaattcaccacgcagagtaacaatgtggattttgcaggaagaattgtttat
gatgacaaaggcgaagagataatcaatttcggaaaatacaaaggccaaaaggtggttgat
gttttgaaaaatgatatgggttattatggttggatgatgaacagtgacttctcattgcat
accaaaaaagtgctgacaaatataaagttgcgaaacttcaataagtga
DBGET
integrated database retrieval system
