Paludibacter propionicigenes: Palpr_1892
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Entry
Palpr_1892 CDS
T01362
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Palpr_1892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_1892
Enzymes [BR:
ppn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Palpr_1892
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Palpr_1892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
nSTAND3
nSTAND6
BetR
AAA_19
Castor_Poll_mid
ATPase_2
TrmB
Motif
Other DBs
NCBI-ProteinID:
ADQ80031
UniProt:
E4T5N7
LinkDB
All DBs
Position
complement(2299552..2302011)
Genome browser
AA seq
819 aa
AA seq
DB search
MKYVDVILPLPLPNTFTYSVPEEWADSVRIGMRVVVPFGKKKMYTAVVYLVHTVMPTVYE
AKDIVCLLDNAPILRRPQMKFWEWISSYYQAFLGDVYQAAVPAGLKLESETRVCINPDYE
AETVLSEKEEKVLMALSDGKPTTVLELNKVTEMRDVMPTLKALLDKGAVEISEELTDKFR
VKTDTFVRMSAEAMQEDNLRKIFDDLGRAKKQLDVLMMYIDLSKCLIPAKYREVSRKELM
EKSGASAAVLAGLVERGVLETYLKEIGRLDISDVSTSAVYPLNEFQQVAIKEIEKQFIEK
PVVLLHGVTSSGKTEIYIHLINKVLAEGKQVLYLVPEIALTTQLTTRLKRVFGKRLGVYH
SKFSDAERVEIWNNVLNDKTYDVIIGVRSSIFLPFRQLGLIIVDEEHESSYKQYDPAPRY
HARNAAIVLASMHAAKTLLGTATPAIETYQNAQTGKFGLVELSQRHEDMAMPEILVVDTK
EAYRKKQMESHFTDTLLERIAKALQNKEQVILFQNRRGYAPYIECKACAYVPHCKNCDVS
LTVHKAFNTLTCHYCGYTEPIPNICPACKMPGTLSTKGFGTEKIEDEIKQIFPDARVSRM
DLDTTRSKKSYEKIISDFEQHKVDILIGTQMVSKGLDFERVSLVGILNADNMLNFPDFRA
HERAFQLMAQVSGRAGRKNKRGTVILQTSSPEHPIIGQVIRNDYQAMFATQCDERKLFKY
PPYFRIIQIVLRHRDSIILNQAAARMAVDLRAVFNNRVLGPNVPAVSRIQNMYIKHILLK
FEVEASAEKAKDILRQVTTNLQSEPKFKSLWINLDVDPM
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacgtcgacgtcatattgccattgccattgcccaatacttttacctactccgtg
ccggaagaatgggcggattcggtgcgtattggtatgcgggtggtggtgccgtttggaaag
aaaaagatgtacactgctgtggtatatctcgttcacacggtgatgcctacggtttacgaa
gccaaagatattgtgtgtctgctggataatgcgcccattctacgtcgtccgcaaatgaag
ttttgggaatggatttcgtcctactatcaagcctttctgggcgatgtgtatcaggctgca
gtgccggccggtttaaagttggaaagcgaaacgcgggtatgcatcaatcccgattacgaa
gccgaaaccgttctttcggaaaaagaagaaaaggttcttatggctttgtccgacggcaaa
cctactacagttctcgagctgaataaagtcaccgaaatgcgcgacgtgatgccgaccttg
aaagcattgttggataaaggtgcagtagaaatcagcgaagaactgaccgataagtttcgg
gtgaagaccgatacctttgtgcgcatgtcagccgaagctatgcaggaagataatctccgc
aagatttttgacgatctcggtcgtgccaaaaagcaactggatgtgctgatgatgtatatt
gatctgtcaaaatgcctcatccctgcaaagtatcgcgaagtttcgcgcaaagagctgatg
gaaaaatcgggagcctcggctgcggtgcttgccggactggtggagcggggcgtattggaa
acttacctgaaagaaatcggacgattggatatttccgatgtgtcgacttctgccgtttat
ccgcttaatgaatttcagcaggtagccattaaagaaatagaaaagcaatttattgaaaaa
ccggtggtgctgttgcacggtgttacgtccagcggcaaaaccgaaatttacatacatctt
attaataaggtgctcgccgaaggtaaacaagtgctttatcttgttcccgaaattgccctg
acaacccaacttactacgcgcttgaagcgggtgtttggtaaacgccttggagtgtatcac
tccaaattctccgatgccgaacgggtggagatatggaacaatgtacttaatgataaaacc
tacgacgttataataggcgtgcggtcgtccatctttcttccttttcgtcagctcgggttg
attattgtggacgaagagcatgagtcgagttacaaacaatacgatccggctccgcgctat
catgcccgcaatgccgccatcgtattggcatccatgcacgctgcaaaaaccttgctcgga
acagctacccctgccatagaaacctatcagaacgcgcaaaccggaaagtttggcttggta
gagcttagtcagcgtcatgaagatatggctatgcccgaaattcttgttgtcgataccaaa
gaagcgtacaggaagaaacaaatggaaagccatttcaccgacaccttgctcgaacgtatt
gccaaagcgcttcagaataaagagcaggttatcctttttcaaaatcgtcgggggtatgca
ccctatatagaatgtaaagcttgtgcctatgtaccgcattgcaaaaactgcgatgtaagt
ctcacggttcataaagcttttaataccctgacttgccattattgcggatataccgaaccg
attccgaatatctgtccggcttgtaaaatgcccggaacactttccacgaagggttttgga
acggaaaagatcgaagacgaaatcaaacagatttttccagatgcacgtgtttcgcgtatg
gatttagatacaacccgttccaaaaagtcgtatgaaaagatcatttccgactttgaacaa
cataaagtcgatattcttattggtacccaaatggtgtcgaaagggctcgatttcgagcgc
gtaagccttgtcggaattctcaatgccgacaacatgctcaattttccggattttcgcgcg
cacgagcgcgcgttccaattaatggcgcaagtcagcgggcgtgcaggaaggaaaaataaa
cgtggtacggtcattcttcaaacttcgtcgccggagcatcccattatcgggcaagttatc
cgaaatgactatcaagctatgtttgccacgcagtgcgacgagcggaagctattcaaatat
cctccgtatttccgcattattcagatcgtccttcgccatcgcgactcgattattctcaat
caggcggcggctcggatggccgtcgatttacgggcggtattcaataatcgtgtactagga
ccaaatgttccggctgtatcacgtatacaaaatatgtatatcaagcatattttgcttaag
tttgaagtggaagcatccgccgaaaaggcaaaagatatccttcgtcaggtcaccactaat
ctgcagtccgaacccaagtttaaatctttatggataaatctggatgtggatccgatgtaa
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