KEGG   Paludibacter propionicigenes: Palpr_1959
Entry
Palpr_1959        CDS       T01362                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
ppn  Paludibacter propionicigenes
Brite
KEGG Orthology (KO) [BR:ppn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppn02048]
    Palpr_1959
Enzymes [BR:ppn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Palpr_1959
Prokaryotic defense system [BR:ppn02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Palpr_1959
SSDB
Motif
Pfam: EcoR124_C T1R_D3-like SWI2_SNF2 ResIII HSDR_N DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: ADQ80098
UniProt: E4T5V4
LinkDB
Position
complement(2370041..2373046)
AA seq 1001 aa
MTKENEIELGLIEKLKDLKYTYRPDIRDRDALELNFRQKFEALNRVHLTDAEFKRLLDEI
VSPDVFASSKRLRAREVFFREDGTPLHYTLVNIKDWCKNDYEVINQLRINTNNSHQRYDV
ILLINGLPVVQIELKALDISPRRAMQQIVDYKNDAGNGYTNTLLCFMQLFIVSNRGNTQY
FANNNNQHFQFNADEQFLPVYQLADVNNKKIAHLHDFSEKFLAKCTLGEMINKYMVLVAN
EQKLLVMRPYQIYAVKAIVDCIHENRGNGYIWHTTGSGKTLTSFKASTLLKDNPDIEKCL
FVVDRKDLDRQTREEFNKFQDGCVEANTNTESLVRRMLSEDYADKVIVTTIQKLGIALDP
ENRANYKERLEPLRDSRMVFIFDECHRSQFGDNHKAIKEFFPNSQLFGFTGTPIFEQNST
QLIREGEYASYKTTENIFQQELHAYTITHAIEDKNVLRFHIDYFKPQGENAPKPGESIAK
QAIVNEILKKHEGATNHRRFNALFATQSINDAIDYYQRFKAFQAQKQAEDADYVPMNIAC
VFSPPTQALANDTENKNDKNLADIKQLQEDLINEKEDNKQDPEGKKQALMAIIADYNAQY
GTNHTISEFDLYYQDVQQRIKDQKYSNKDYPHRNKIDIVIVVDMLLTGFDSKFLNTLYVD
KNLKYHGLIQAFSRTNRILNDSKPYGNILDFRQQQEAVDTAIALFSGEKDENKAKEIWLV
DPAPKVIEKFEEAVAALQDFMQKSDLTCAPQEVYNLKGDTARINFINRFKEVQRLKTQLD
QYTDLQPEQKELIEHILPTDQLLEFRSSYLETAKKLKEKRDKEGDKAEPAIQEIDFEFVL
FASAIIDYDYIMGLISKFTQNKPSKQKMSREQLINLLSSSANLMDERDDIAAYIKTLEEG
KGLSEKEIRDGYQIFKAEKFAKQINETAQKHGLETEALKAFVEGIISRMIFDGEQLSDLL
APLELGWKDRTKKELALMEDLVPLLKKLAQGHEISGLKAYE
NT seq 3006 nt   +upstreamnt  +downstreamnt
atgacaaaagaaaacgaaatagaactcggtctgattgagaaactcaaagacctcaaatac
acttaccgccctgatattcgggacagggatgctcttgaattgaatttcagacagaaattt
gaagcacttaaccgtgtgcatcttactgatgcggaattcaaacgtctgttagacgaaatt
gtaagtccggatgtatttgcttcttctaaaagattgcgtgcaagggaagttttctttcgg
gaagatggaacaccgcttcattatacgctggtcaatatcaaagactggtgtaaaaacgat
tatgaggtaattaatcaactgcgtatcaacaccaataacagtcatcagcggtacgatgtg
attttgctgataaacggtttacctgtggtgcagatagagttaaaggctttggatataagc
ccacgacgagccatgcagcaaattgtggattataaaaacgatgcaggtaatggttacacc
aatacgctgctttgttttatgcagttgtttattgtgagcaaccgtggtaatacacagtat
tttgccaataacaataatcagcattttcagtttaatgccgacgaacaatttctgcctgtt
tatcagttggctgatgtaaataataagaagattgctcacctgcacgatttctctgaaaag
tttcttgcaaagtgtacgctgggcgaaatgattaataaatacatggtgctggtagctaac
gaacaaaagctgttggttatgcgcccataccagatttatgcggtaaaagccattgtggat
tgtattcacgaaaaccgtggcaacggttatatctggcatactacaggtagcggaaaaaca
ctgacttcgtttaaagcctctaccctgctgaaagataatccggatattgaaaaatgcttg
tttgtggtggatagaaaagatcttgaccgtcagacccgcgaagaatttaataagtttcag
gatggttgtgtggaagccaatacaaataccgaaagtttagtgcgccgtatgctgtccgaa
gattatgccgataaggtaatagtaaccactattcaaaagctcggtattgctcttgatccc
gaaaaccgggcaaattacaaggaacgacttgaaccgcttcgcgatagtcgtatggtgttt
atctttgatgaatgtcatcgttcgcagtttggcgataatcataaagccattaaagaattc
tttcccaactcacaattgttcggttttacgggtacacctatttttgaacagaactctacc
caactgatacgtgagggtgaatatgcttcgtataaaactacagaaaacattttccaacag
gaattacacgcttacaccattacccatgctattgaggacaagaatgtgttgcgttttcat
atcgattactttaaaccacagggtgagaatgcacccaaaccgggcgaaagtatagccaaa
caagctattgtaaacgagattttgaaaaagcatgaaggcgccaccaaccaccgacggttt
aatgcgctgtttgctacacaatcgataaacgatgccattgattattatcagcggtttaaa
gcttttcaggcacaaaaacaagcggaagatgcagactatgtgccgatgaatatagcttgt
gtgttttcgccaccaacacaggcattagcgaacgacactgaaaataaaaacgataagaat
ctggctgatatcaaacagttacaggaagatttaatcaacgaaaaggaagataacaagcaa
gaccccgaaggcaaaaaacaagctctgatggctattattgccgattacaatgcgcaatac
ggtacaaatcatactatcagcgagttcgatttgtattatcaggatgtgcagcaacgcatc
aaagaccaaaaatacagcaataaagattatccgcaccggaataaaattgatatagtgatt
gtagtggatatgttgctcacaggtttcgattccaagtttctgaatacgctttatgtagat
aaaaacctgaaatatcacggactgattcaggctttttcgcgtaccaatcgtatattaaac
gatagcaagccttatggtaatatccttgatttccgtcagcaacaggaagcggtagataca
gctattgcattgttctcgggcgagaaagatgaaaacaaggccaaagaaatatggttggtg
gatcctgcaccgaaagtgatagagaaatttgaagaagcggtagctgctttacaggacttt
atgcaaaaaagcgatttaacctgtgctccgcaggaagtgtataacctgaaaggcgatacg
gcaaggatcaactttatcaaccgctttaaggaagtgcaacgactgaaaacgcagctcgac
caatataccgatttgcagcccgaacaaaaagagctgatagagcatattttgcctaccgac
caattgctggaattccgaagctcgtatctggaaacagcaaaaaaactgaaagaaaaacgt
gacaaagaaggcgacaaagccgaaccggccattcaagagatcgatttcgagtttgtgctg
tttgcttcggccattatcgactacgattatatcatgggcttgatttccaagttcacccag
aataagccttcgaaacaaaagatgagtcgggagcagttgattaacctgcttagttcgagt
gcaaacctgatggatgaacgggatgatattgccgcctatattaaaacactggaagaaggc
aaaggactgtcggaaaaggaaattcgggatggttaccaaatctttaaagcagaaaagttt
gccaaacaaataaacgaaaccgcgcaaaaacacggattagaaacagaagcattgaaagcc
tttgtagagggtattatctcccgtatgatattcgatggcgaacaactcagtgatttgtta
gcaccattggaattagggtggaaagaccgcaccaaaaaagaactggcactcatggaagat
ttagtacctctgcttaaaaaattagcacagggacacgaaatatcaggattaaaagcgtat
gaataa

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