Paludibacter propionicigenes: Palpr_2060
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Entry
Palpr_2060 CDS
T01362
Name
(GenBank) peptidoglycan glycosyltransferase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn00550
Peptidoglycan biosynthesis
ppn01100
Metabolic pathways
ppn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Palpr_2060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Palpr_2060
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppn01011
]
Palpr_2060
Enzymes [BR:
ppn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Palpr_2060
Peptidoglycan biosynthesis and degradation proteins [BR:
ppn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Palpr_2060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ADQ80197
UniProt:
E4T653
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All DBs
Position
2500692..2502530
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AA seq
612 aa
AA seq
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MINDTLQNRRYVIGGIMTAVVILYILRLFSIQIIETKYKNGAESNAFLRKTQFPSRGLIY
DRNHKLLVYNKPAYDITLIVREIHDLDTLAFCKALKIDKQFFINRIAEIKDYRKNPSYSS
YTPQLFMTQLGIEDIATIQQSMYKYPGFYIQNRTLREYAYPNAAHVLGSIGEVSQKRIEN
DDYYKTGDYAGRDGIEYTYEEQLRGEKGVEILLRDAKGRIKGKYENGKEDVSPKAGENLT
LTLDFQLQILAEKLLQGKIGSVVAIEPETGEILAMASNPTFNPGILVGRQRSKNYNSLLK
DPTKPLMNRATQGQYSPGSAFKTLQALVCQQMGGITEHTLFSCNGPESSPVKCTHHHGSP
VSLLSAVEQSCNPYFWNAFRATIEKNGYGPKNINFRTTYDEWVDRVKSFGLGEKFKDGDL
YEQSRGYIPTQKFYNKVYRSEKGWRAITIRSNSIGQGEIMATPLQMANLMCAIANEGHYI
TPHLNKCDSMLKKIHQCKVDKKYFPVVFEGMWRVFEYGTARSSKIPGIDMCGKTGTVQNS
HGKDHAFFVGFAPRVHPKIAIAVIVENAGFGNTFAAPIFSLLAEQYLKGKITRTELEEKT
TNTVTNSYVQER
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgataaacgacacactccaaaatcgaaggtatgtgattggcggaatcatgacagcagtc
gtcattttatatattttgcgtttgtttagcatccagattattgaaacaaaatataagaat
ggtgcggaaagtaatgctttcctgagaaaaacgcaattcccatccagagggctcatatac
gacagaaatcacaaactgttggtgtacaacaagcctgcttacgatattaccctcattgtt
cgtgaaattcatgatttagatactttggctttctgtaaagctctcaaaatcgacaaacaa
tttttcatcaaccgcattgctgaaattaaagattacagaaaaaatcctagttattcgtcg
tacactccacagctttttatgacacagctcggcattgaggatattgctactattcagcaa
tcgatgtacaaataccccggattttacatacaaaaccgtaccctgcgtgaatatgcctac
ccaaacgcggctcatgtgttgggtagtatcggagaggtttcgcaaaaaagaattgaaaat
gacgactactacaaaaccggcgattatgcaggcagagacggcatagaatatacttatgag
gaacaattgcgaggcgaaaaaggagtggaaattttgctgcgcgatgctaaaggcagaatc
aagggaaaatatgaaaatggaaaagaagatgtgtctcctaaagccggtgaaaacctgact
cttactttagatttccaactgcaaatactcgccgaaaaacttttacaggggaaaatcgga
agtgtggtagccatcgaaccggagaccggcgaaattttagcaatggcttccaacccaacc
tttaatccaggcattctggtaggacgtcagcgttcaaaaaattacaactcgctactcaaa
gacccaaccaaaccattgatgaaccgggcaacacaaggtcagtattctcccgggtcagca
tttaaaaccctccaggcactggtttgccagcaaatgggtggaattacggaacatacattg
ttcagttgtaacggtccggaatcatctcctgtaaagtgtacgcaccaccacggttctccg
gtaagcctgctgagtgctgttgagcaaagttgtaacccttatttctggaatgcattcagg
gcaacgattgaaaagaacggatatggaccaaaaaatatcaatttcagaaccacttatgat
gaatgggttgatcgggtaaaaagttttgggctaggagaaaaattcaaagatggtgatctt
tatgaacagtctcgcggatacatccctacgcaaaaattctacaacaaggtttatcgttcg
gaaaaaggatggcgtgccattactatccgttccaactcgatagggcaaggtgaaattatg
gctactccgcttcaaatggctaacctgatgtgtgctatagccaacgagggacattatatc
acaccacacctgaacaagtgtgactcgatgctgaaaaaaattcatcagtgcaaggtggat
aagaaatactttccggttgtatttgaaggaatgtggcgtgtatttgagtatggtacagcc
agaagttcaaaaattccgggaatagacatgtgtggaaaaacgggaactgtgcagaacagc
catggtaaagaccacgcattctttgtgggttttgccccaagagtgcatcctaaaattgct
atagcagtaattgtagaaaatgccggattcggaaacacgtttgccgcacctatttttagt
ttactggccgagcaatacctcaaaggtaaaattactcgtaccgaattagaagaaaaaacg
actaatacagtgaccaactcgtatgtacaagaacgttag
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