Paludibacter propionicigenes: Palpr_2162
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Entry
Palpr_2162 CDS
T01362
Name
(GenBank) RNA polymerase, sigma-24 subunit, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Palpr_2162
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppn03021
]
Palpr_2162
Transcription machinery [BR:
ppn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Palpr_2162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_40
PhyR_sigma2
HTH_30
HTH_10
HTH_11
PCI
HTH_Tnp_4
UPF0122
HTH_24
DUF722
HTH_Tnp_ISL3
HTH_38
PLDc_2
HTH_23
Chlamy_scaf
BNI5_helical
Motif
Other DBs
NCBI-ProteinID:
ADQ80298
UniProt:
E4T6F4
LinkDB
All DBs
Position
complement(2629012..2629572)
Genome browser
AA seq
186 aa
AA seq
DB search
MLETIKDLREGNHLAFEQLFDDCYEALCRYAYSILRDMDDAEDIVQKTFCKLWDQHESLD
IQSSVSSYMYRIVHNNCLNTIHQKTSHLEHNLNYISSMNTDVNSTADYIESTDLQKAIDT
ALASLPPQCRKVFEMSRIEQLSYAEIALQLNISTNTVENHISKALKILRVELKDFLFLCL
LLRLLK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgttagagacaataaaggatttgcgggaaggaaatcacttagcatttgagcaacttttc
gacgattgttatgaggcattgtgcaggtatgcatactctattttaagagatatggatgat
gccgaagacattgttcaaaagacattttgcaaattgtgggaccagcacgaatcgctggat
attcaaagttccgtcagttcatacatgtatcgcattgtacacaataattgcctgaacact
attcatcagaaaaccagtcatctggaacataacctgaactacatttcgtcaatgaataca
gatgtaaactcaacagcagattacatagagagcacagatttacagaaagccattgacact
gccctggcaagcctgccaccgcaatgccggaaagtatttgaaatgagccgtatagaacag
ttatcgtatgctgagatagcgttgcaacttaatatctctaccaatacggtagaaaatcat
atttcgaaggctctgaaaatcctccgggtagaattaaaagattttttatttttatgttta
ttgcttcggttactaaaataa
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