Paludibacter propionicigenes: Palpr_2197
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Entry
Palpr_2197 CDS
T01362
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn03030
DNA replication
ppn03410
Base excision repair
ppn03420
Nucleotide excision repair
ppn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Palpr_2197
03410 Base excision repair
Palpr_2197
03420 Nucleotide excision repair
Palpr_2197
03440 Homologous recombination
Palpr_2197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppn03032
]
Palpr_2197
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_2197
Enzymes [BR:
ppn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Palpr_2197
DNA replication proteins [BR:
ppn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Palpr_2197
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Palpr_2197
NER (nucleotide excision repair)
GGR (global genome repair) factors
Palpr_2197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ADQ80333
UniProt:
E4T6I9
LinkDB
All DBs
Position
2679498..2682347
Genome browser
AA seq
949 aa
AA seq
DB search
MKKLFLVDAYAIIYRAYYAFIRNPRVNSKGLNTSAIFGFVNTLEDVLKREKPTHIAVAFD
PKGKTFRHEAYEQYKAQREATPEDIRLAVPIIKNLIKAYNIPALEIPGYEADDVIGTMAK
KAEQAGFEVFMLTPDKDYGQLVSDHIFMYRPKHTGGFETMGPDEVKAKYDLDSHEQVIDL
LGLMGDASDNIPGCPGVGEKTAVKLLKEFGSIDTLLSRTGELKGALKTKIEENKEQIIFS
RFLATIKVDVPIDFDEKSLEIVPRNETELRALFDELEFRTMSAKLATPFSSFPPDQPLPS
IRQVKPKPAGQMSLFDEAESNDVKPTEKQSDAAPADEQQVVVSTSGMKGLENIPHKYVLI
DTKVKRSNLISQLFIQKSVCFDTETTGLDMFTSDLVGMSFCFAEGEAYYVSLPEDKTESK
EVLREFKAFFENDRIEKIGQNMKFDLLMLWQYGIELKGKLFDTMIAHYLVQPELRHGMDY
LAEIYLNYRTIHFEDLVGAKGKNQADIRTVDINKLCDYAAEDADVTFRLKQILEKELKAD
ALENLFYEIEMPLMQVLATMEHTGVRIDSEALRQSSVILTDEMLKLEKEIHQLAGYEFNV
SSPMQVGEILFDRLKLDDKAKKTKTGQYSTSEDILEKLQSKHPIIGKILDYRGLKKLLST
YIDALPQLISPITGKVHTSYNQTVAATGRLSSTNPNLQNIPIRDAQGKEIRKAFIPDADC
LFFSADYSQIELRIMAHLSGDKNMLEAFNSGHDIHTATAAKIYKIPLEEVTSDMRRKAKT
ANFGIIYGISVFGLSDRLSIPRAEAKELIEGYFATYPDVKKYMDNAIQKAKEMGYVETLL
GRKRFLPDINSQNSIVRGFAERNAINAPIQGTAADIIKIAMVRIQNRLENESLQAKMTMQ
VHDELNFTVPKNELEALQKAVIEEMENAIKLQVPLIADCGVGANWLEAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagttattccttgttgatgcttacgctatcatatacagagcttattacgctttt
atccgaaaccccagagtaaattcaaaagggctgaacacatcggctatttttggatttgtc
aacacgcttgaagacgtacttaaacgcgaaaaacccactcatattgccgtcgctttcgac
cccaaaggcaagacttttcgtcacgaagcttacgagcaatacaaagcgcagcgcgaagct
acaccggaagacatccgactggcggtgccaatcataaaaaacctcattaaagcctacaac
attccggcgttggaaatccccggatatgaagctgacgacgtaatcggaaccatggctaaa
aaagccgaacaggcaggatttgaagtcttcatgcttacgcccgacaaagattatggacag
ttggtgtctgaccacatttttatgtaccgcccaaaacataccggcggtttcgaaactatg
ggcccggacgaagtaaaagcaaaatacgatctggacagccacgaacaggttatcgacttg
ctcgggttgatgggcgatgcatccgataatatccccggctgccccggcgtgggtgaaaaa
acagcggtgaaactgttgaaagaattcgggagcattgacaccctgctttcgagaaccggt
gaactgaaaggggcattgaaaacaaaaatagaagaaaacaaagagcaaattattttctca
cgtttcctggctacgattaaagtagatgttcccatcgattttgatgaaaagagcctggaa
atagtgccccgtaacgaaaccgaactgcgggctttgtttgatgaactcgaattccgtact
atgtcggccaaactggcaactccttttagctcatttcctcccgatcagccattgccaagt
atcaggcaggtaaagccaaaacctgccggacaaatgtctttgtttgatgaagctgaaagt
aatgacgttaagccgactgaaaaacaatctgacgctgcaccggctgacgaacagcaagtg
gttgtttcaacctccggtatgaaggggctcgaaaatattcctcataagtatgtgctgatc
gatactaaagtaaaacgctcgaaccttatttcgcagctttttatccagaaatctgtttgt
ttcgataccgaaactaccggactggacatgtttacctctgatttggtagggatgtcattc
tgttttgcagaaggcgaagcatattatgtttcgttgcccgaagacaaaacagaatcgaaa
gaagtgttgcgtgaattcaaagctttttttgaaaatgacagaatcgagaaaataggtcag
aacatgaaattcgatttgctgatgctctggcaatatggtattgagctaaaaggaaagctt
ttcgacaccatgattgcgcattatctggttcaacctgaattgcgtcacggtatggattat
ctggcagaaatttacctgaattaccgaaccattcattttgaagatttagtcggagcaaaa
ggaaaaaatcaggcagacatacgcacggtggacatcaataaattatgcgactacgcagcc
gaagatgcggatgtgactttcagactgaaacaaatattagaaaaagaattgaaagcagat
gcgcttgaaaatcttttctacgaaatagaaatgccactgatgcaagtgctggccaccatg
gagcataccggagtacgcatcgacagcgaagctctgcggcagagttcggtgattctgacc
gacgaaatgttgaagctcgaaaaagagatacaccaactggcaggatacgaatttaatgtc
agctcgcctatgcaggttggcgaaatacttttcgaccgactgaaactggatgataaagcc
aagaaaaccaaaaccggacaatactccacttcggaagacattctggagaaactacaatcg
aagcatccgattatcggcaagattctggactatcgcggtttaaaaaaactactcagcacc
tatatcgatgctttgcctcagttaatcagtccgattacaggcaaggtacatacttcgtac
aatcagacggtagcggctaccggtcgactcagttccacgaatccgaacctgcaaaacatt
ccgattcgggatgcgcaaggcaaagaaatccgcaaggcatttatccccgatgcagattgt
ttgtttttcagtgccgattattcgcaaattgaacttcgcattatggctcacctgagcggc
gataaaaatatgctggaggctttcaatagcggacacgatatccacaccgctaccgcagcc
aaaatctacaaaattccgttggaagaagtgacttcggatatgcgccggaaagctaaaacg
gctaacttcgggattatttacggcatatcggtgttcggactgtcggacaggttgagtatt
ccgcgtgccgaagccaaagaacttatcgagggttactttgccacctatcccgacgtaaag
aaatacatggataacgctattcagaaagccaaagaaatgggctatgtggaaacgttgctt
ggacgcaaacgctttctacccgatatcaactcgcaaaacagcattgtgcggggttttgcg
gagcgaaacgccatcaatgcaccgatacagggcacggcagccgatattatcaaaatagcc
atggtacgcatacaaaaccgattggagaatgaaagcctgcaagccaaaatgaccatgcag
gtacatgatgagttgaacttcaccgttccgaaaaatgagcttgaagccctacaaaaagct
gttattgaagaaatggaaaatgccatcaaacttcaggtgcctcttattgccgactgtggt
gtgggcgccaactggctggaagcgcattaa
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