Paludibacter propionicigenes: Palpr_2861
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Entry
Palpr_2861 CDS
T01362
Name
(GenBank) bacterial nucleoid protein Hbs
KO
K03530
DNA-binding protein HU-beta
Organism
ppn
Paludibacter propionicigenes
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppn03032
]
Palpr_2861
03036 Chromosome and associated proteins [BR:
ppn03036
]
Palpr_2861
03400 DNA repair and recombination proteins [BR:
ppn03400
]
Palpr_2861
DNA replication proteins [BR:
ppn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Palpr_2861
Chromosome and associated proteins [BR:
ppn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Palpr_2861
DNA repair and recombination proteins [BR:
ppn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Palpr_2861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF2267
Motif
Other DBs
NCBI-ProteinID:
ADQ80990
UniProt:
E4T8E6
LinkDB
All DBs
Position
3419804..3420076
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELINAIAAEAGLSKADAKKALDAVVKSVSDALVAGDKVSLVGFGTFSVSERSARSG
INPATKQPIKIAAKKVAKFKAGAELTAAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagcagaattaatcaatgccatcgctgctgaagcaggtctaagtaaagctgac
gcaaaaaaagctcttgacgcagtagttaaaagtgtatctgacgcccttgttgcaggcgat
aaagttagtttagttggtttcggtactttctcagtatctgaacgttcggctcgctcgggc
atcaacccagctacaaagcaaccaatcaaaattgctgcaaaaaaagttgctaaatttaaa
gcgggagctgaattgacagctgcagtaaactaa
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