Paludibacter propionicigenes: Palpr_2907
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Entry
Palpr_2907 CDS
T01362
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ppn
Paludibacter propionicigenes
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppn03016
]
Palpr_2907
Enzymes [BR:
ppn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Palpr_2907
Transfer RNA biogenesis [BR:
ppn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Palpr_2907
Prokaryotic type
Palpr_2907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
HopBA1
Motif
Other DBs
NCBI-ProteinID:
ADQ81036
UniProt:
E4T8J2
LinkDB
All DBs
Position
complement(3470455..3471210)
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AA seq
251 aa
AA seq
DB search
MKRRYFIYFSYKGTAYHGWQMQPNGISVQEVLTRALCTILRTNLEIVGAGRTDAGVHAKL
MVAHFDFETALPSEFDLVAKLNSFLPGDISIYKIAEVKPDAHARFDAISRRYEYHIFTNK
NVFKNELAVRESDKLDFEAMNLAAKTLTKFKDFTSFSKLHTDVKTNNCQIHHAEWTQQGD
EWVFTIEADRFLRNMVRAIVGTLFEVGRRKMNTDEFATVIAAKNRCKAGVSVPAHGLYLV
DIKYPDHIFIN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgacgatacttcatatatttctcctacaaaggcaccgcttaccatggctggcaa
atgcagcccaatggaatttcagttcaggaagtactgacacgagctttgtgcaccatttta
cgcaccaatcttgaaattgtaggtgcaggcagaaccgatgccggcgtgcacgccaaactt
atggttgctcactttgattttgagactgctttaccttctgaatttgatctggtagccaaa
ttaaacagttttctgcccggtgatatttctatttataaaattgctgaagttaagcctgac
gcccatgcacgtttcgatgctatttcccgtcgatatgaataccatatcttcaccaataaa
aatgttttcaaaaatgaactcgccgtacgagaaagcgacaagctcgattttgaagcgatg
aatctggcagctaaaacccttacgaaatttaaagattttaccagcttcagcaaacttcac
actgacgtaaaaacgaacaattgccaaattcatcatgccgaatggacgcaacagggcgat
gaatgggttttcactattgaagccgaccgctttttacgaaatatggttcgtgcgattgtt
ggcacactattcgaagtggggcgacgaaaaatgaatactgacgaattcgcaacagttatt
gcagctaaaaaccgttgtaaagcaggcgtttctgttcctgctcacgggctatacttggtc
gatattaaatatcctgaccatatctttataaattaa
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