Paludibacter propionicigenes: Palpr_2908
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Entry
Palpr_2908 CDS
T01362
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppn
Paludibacter propionicigenes
Pathway
ppn00061
Fatty acid biosynthesis
ppn01100
Metabolic pathways
ppn01212
Fatty acid metabolism
ppn02024
Quorum sensing
ppn04146
Peroxisome
Module
ppn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Palpr_2908
00071 Fatty acid degradation
Palpr_2908
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Palpr_2908
09145 Cellular community - prokaryotes
02024 Quorum sensing
Palpr_2908
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppn01004
]
Palpr_2908
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppn04147
]
Palpr_2908
Enzymes [BR:
ppn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Palpr_2908
Lipid biosynthesis proteins [BR:
ppn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Palpr_2908
Exosome [BR:
ppn04147
]
Exosomal proteins
Exosomal proteins of breast milk
Palpr_2908
Exosomal proteins of breast cancer cells
Palpr_2908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ADQ81037
UniProt:
E4T8J3
LinkDB
All DBs
Position
complement(3471313..3473076)
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AA seq
587 aa
AA seq
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MNVTRLFDLLDNYIENYPDQDAALVCKREGAWKKFSICEYVELTNDLSYGMLALGIQPGD
KIGIVSSNRPEWNMLDFAAMQIGAVSIPIYPTISQNDYSHILNHAEMKMIFIEGKELRTK
LKPILPEIKTLKEIFTFSDENSEYKYLDQLITLGKENRQPDKLIQLKASIKPDDLATIIY
TSGTTGSQKGVMLSHQNIVSQLKSLESIPAKWSNKALSFLPLCHAYERMLVYLYQYLGMS
VYYAESLGTIAENIKEINPTMMSCVPRLLEKIYDKLYLSGKKLPFFSKIIYYWAFNLATK
FQLEEMGWYYNIKYKLAEKLIYSKWRAAIGGNFDIVVSGGSAIQPHIASFFSAIGMPVFE
GYGLSETSPVIAVSQRGENGRKFGTVGLPLQGVEVKLAERDEIICRGHNVMLGYYKDPAL
TAQAIDNDGWFHTGDTGKFTPEGQLIITGRLKSIFKTSFGKYVNPQAIESRFTESAFIEN
MIVLGENKKFAAALLSPDFIYLKSWCNKHKIKYSTNAEMIEHPAIVKRYQEEIKHYNQFF
GDFEQIKRYKLVPDEWTTADGFLSPTLKIKRNVIESHYADAIEKLFS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaaccagattatttgatctgctggataattatattgaaaattatccggatcag
gatgcagctttggtgtgcaaacgcgaaggtgcttggaaaaaattcagcatctgtgaatat
gtggaactaaccaatgacctaagttatggcatgctggcattaggcattcagccgggcgac
aaaatagggattgttagcagcaaccgccccgagtggaacatgcttgattttgcggcgatg
caaatcggagcagtttctattcctatttatcccactatcagccagaatgattacagccac
atacttaatcatgccgagatgaaaatgattttcatcgaagggaaagagcttagaaccaag
cttaaacccatccttcctgaaatcaagacactaaaagaaatatttacgttctctgatgaa
aacagcgagtataaatacctcgaccagcttataacgctaggcaaagaaaatcgccagcca
gacaaacttatacagctcaaagcttcaataaaacccgatgatttagcaactatcatctat
acttcaggcactaccggaagtcaaaaaggtgtaatgctttctcaccaaaacatagtaagc
caattaaaaagtcttgaatcgattcctgctaagtggagcaacaaagcattgagcttcctc
ccactctgtcatgcatacgagcgtatgttggtgtatctttatcaatacctcggcatgtct
gtgtattatgccgagagccttggtacaattgcagaaaacatcaaggaaataaatccaacg
atgatgtcgtgcgtaccacggttgcttgaaaagatatacgataaactttatctatcagga
aaaaagctgccttttttcagcaaaataatctattattgggcttttaatttggctaccaaa
ttccaattagaagaaatggggtggtattataatatcaaatataaactggccgaaaaactg
atttattccaaatggagagctgctataggtggcaatttcgacatagttgtatcgggagga
tcggctattcaacctcatattgcttcatttttctctgccataggaatgcctgttttcgag
ggttatgggttaagcgaaacttcacccgtaatagctgttagtcaacgtggcgaaaatggt
cgtaaatttgggacagtgggcttaccgctccagggagttgaagtcaaattagccgaacgc
gatgaaataatctgtcgtggtcacaatgtcatgctaggctattacaaggacccagctctc
accgctcaggcaattgataacgatggttggttccacaccggcgacacgggcaaattcaca
cccgaaggtcagctgataattaccggtcgtttaaaaagcattttcaaaacctcgtttggc
aaatatgtaaatccgcaggcaatagagtcaagattcaccgaatcggcatttatcgaaaac
atgattgtattgggtgaaaacaaaaaatttgcagcggcattactatcgcccgattttatc
tatttaaaatcgtggtgtaataaacataaaatcaaatacagtaccaatgctgaaatgata
gagcatcctgcaattgtaaaacgttatcaggaagagataaagcactacaatcagttcttt
ggtgatttcgaacaaattaagcgttacaaactagtgcccgacgaatggaccactgccgat
ggttttctttcgcccactttaaaaatcaaacgaaatgtcatcgagtcgcattatgcagac
gccattgaaaagcttttctcataa
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