Paludibacter propionicigenes: Palpr_2925
Help
Entry
Palpr_2925 CDS
T01362
Name
(GenBank) 23S rRNA m(5)U-1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
ppn
Paludibacter propionicigenes
Brite
KEGG Orthology (KO) [BR:
ppn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppn03009
]
Palpr_2925
Enzymes [BR:
ppn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Palpr_2925
Ribosome biogenesis [BR:
ppn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Palpr_2925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
PabTrmU54_TRAM_dom
TRM5-TYW2_MTfase
TRAM
Methyltransf_15
Methyltransf_25
N6_N4_Mtase
Cons_hypoth95
PrmA
Motif
Other DBs
NCBI-ProteinID:
ADQ81054
UniProt:
E4T8L0
LinkDB
All DBs
Position
complement(3500165..3501574)
Genome browser
AA seq
469 aa
AA seq
DB search
MAKNKKPLPIFEKITITDIAAEGKAIAKVNDVVIFVPFVVPGDVVNLQVTRKKSHFMEAR
AIHFHTLSDKRTNAVCEHYGICGGCKWQILPYQEQINYKQKQVVDNLTRIGKIDLPPVSP
ILGSAKTEFYRNKLEFTFSNKRWRTNEEIAEGKIFDTMNAVGFHIPGQFDKVLDINKCWL
QTEDSNEIRNEVRRYALEHELTFFDLRSQEGFLRTLMVRTTSTGELMIIMVFFHEDKEAQ
NALLQHIADKFPQITSLLYIINSKANDTITDQEIHIFKGNECIYEEMEGLKFKIGPKSFY
QTNSDQAYELYKITRNFAQLTGNELVYDLYTGTGTIANFISHQAKQVIGIEYVPEAIEDA
FVNSEINKISNTLFYAGDMKDILNAAFIEEHGKPDVIITDPPRAGMHEDVINAILFAAPE
RIVYVSCNPATQARDLSLLDCQYKVTAIQPVDMFPHTHHVENVVLLERK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaataaaaagccacttcccatctttgaaaaaataacgatcacagacattgcc
gccgaaggcaaagcaatagccaaagtaaatgatgttgtgatttttgtaccttttgttgtc
cccggtgatgttgttaatctacaggtcactcgcaaaaaaagccattttatggaagcacgc
gctatccattttcatactttatccgacaaacgtaccaacgctgtttgcgagcattatgga
atatgtggcggctgcaaatggcagatattaccttatcaggaacaaataaactataagcaa
aaacaagttgtagataatcttacccgaattgggaaaattgatttacctccagtgtcacct
attttaggctctgcaaaaacagaattttatcgtaacaaactggaattcactttctcgaac
aaacgctggcgtaccaacgaagaaattgcggaaggcaaaattttcgacaccatgaatgct
gttggatttcatattcccggacagtttgataaagtactggacatcaataaatgctggttg
caaaccgaagattcaaacgaaatcagaaatgaagttcgccgatacgcccttgagcacgag
ctcactttctttgacctgcgtagtcaggaaggatttttgcgcacattgatggttcgtact
acatccactggtgagctaatgattatcatggtgtttttccacgaagacaaggaagcccag
aatgcacttctgcaacacattgcagacaaatttccacagataacttctttgctctatatt
ataaattccaaagccaacgatacaattactgatcaggaaatacatatattcaaagggaat
gaatgtatttacgaagaaatggaaggattgaagtttaaaatcggtccaaaatcattttac
caaacaaactcagatcaggcttatgaattatacaaaataactcgtaattttgctcagctt
accggaaatgagttggtctatgatctttacactggtaccggaaccattgcaaatttcatt
tctcatcaggcaaaacaagtcattggcattgaatacgttcctgaagctatagaagatgcc
tttgtaaattctgaaataaataagataagcaatacgcttttttatgctggcgacatgaaa
gacattttaaatgcagctttcattgaagaacacggtaaaccggatgttatcattaccgat
ccgcctcgggcagggatgcatgaagatgtaattaatgccatcctttttgcagctcctgaa
cgaatagtttatgttagctgcaatcctgcaactcaggcacgagatttgtctttactggat
tgtcagtacaaagtaacagctattcaacctgttgatatgtttccacatacgcaccatgtt
gaaaatgttgtattattagagcgcaaataa
DBGET
integrated database retrieval system
