Pandoraea pnomenusa DSM 16536: LV28_00815
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Entry
LV28_00815 CDS
T03411
Name
(GenBank) isocitrate lyase
KO
K01637
isocitrate lyase [EC:
4.1.3.1
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00630
Glyoxylate and dicarboxylate metabolism
ppnm01100
Metabolic pathways
ppnm01110
Biosynthesis of secondary metabolites
ppnm01120
Microbial metabolism in diverse environments
ppnm01200
Carbon metabolism
Module
ppnm_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LV28_00815
Enzymes [BR:
ppnm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
LV28_00815
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Gene cluster
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Motif
Pfam:
ICL
PEP_mutase
CUPID
Motif
Other DBs
NCBI-ProteinID:
AIU25294
UniProt:
A0A378YBR5
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All DBs
Position
complement(3005033..3006355)
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AA seq
440 aa
AA seq
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MTTRQEQVKQLEQDWANNPRWKGIKRGYSAEDVVRLRGSIQPEQTLARRGAERLWSMIND
EPFVNALGALTGNQAMQQVKAGLKAIYLSGWQVAGDANLAGEMYPDQSLYPANSVPQVVR
RINNTFTRADQIQWSEGKNPGDEGYIDYFAPIVADAEAGFGGVLNAFELMKAMIEAGAGG
VHFEDQLASVKKCGHMGGKVLVPTREAVAKLVAARLAADVLGVPTVLIARTDAEAADLIT
ADVDPLDQPFCTGERTVEGFYRTRNGLDQAIARGLAYAPYADLVWCETGKPDLEFAKQFA
EGIHKHFPGKMLSYNCSPSFNWKKNLDDATIAKFQKELGAMGYKFQFITLAGFHSLNYSM
FNLAHGYARRQMSAFVELQEAEFAAADKGFTAVKHQREVGTGYFDAVTQTIERDASTTAL
KGSTEDEQFFDEKKAQVKAA
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccgtcaagagcaagtgaagcaactcgagcaggactgggcgaacaacccgcgc
tggaagggcatcaagcgtggctactcggccgaggacgtggtgcgtctgcgcgggtcgatc
cagccggaacaaacgcttgcccgccgcggtgcggagcgcctgtggagcatgatcaacgac
gagccgttcgtgaacgccctgggcgctctgaccggcaaccaggccatgcagcaggtcaag
gccggcctgaaggcgatctatctgtcgggctggcaggtggcgggcgacgccaacctcgcg
ggcgagatgtaccccgaccagtcgctgtacccggccaactcggtgccgcaggtcgtgcgc
cgcatcaacaacaccttcacgcgcgctgaccagattcagtggtcggaaggcaagaacccg
ggcgacgagggctacatcgattacttcgcgccgatcgtggccgatgccgaagccggcttc
ggcggcgtgctcaacgccttcgaactgatgaaagcaatgatcgaagcgggcgccggtggc
gtgcacttcgaagaccagctcgcttcggtgaagaagtgcggccacatgggcggcaaggta
ctggtgccgacgcgcgaggcggtggccaagctggtcgccgcgcgcctggccgccgacgtg
ctcggcgtgccgacggtgctgatcgcccgtaccgatgctgaagccgccgacctgatcacc
gcggacgtcgatccgctcgaccagccgttctgcaccggcgagcgcacggtcgaaggcttc
taccgcacccgcaacggtctcgaccaggccatcgcccgcggtctggcctatgcgccgtac
gccgatctggtgtggtgcgaaaccggcaagccggatctcgaattcgcgaagcagttcgcc
gagggcattcacaagcacttcccgggcaagatgctttcgtacaactgctcgccgtcgttc
aactggaagaagaacctcgacgacgccaccatcgccaagttccagaaggaactcggcgcc
atgggctacaagttccagttcatcacgctggccggcttccacagcctgaactactcgatg
ttcaacctggcacacggctacgcccgtcgtcagatgagcgccttcgtggagttgcaggaa
gccgaattcgccgctgccgacaagggcttcacggcagtcaagcaccagcgcgaggtgggt
acgggctacttcgatgccgtcacgcaaacgatcgagcgcgacgcatcgaccacggccctg
aagggttcgacggaggacgaacagttcttcgacgagaagaaggcgcaggtcaaggcagcc
tga
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