Pandoraea pnomenusa DSM 16536: LV28_00885
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Entry
LV28_00885 CDS
T03411
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppnm03400
]
LV28_00885
DNA repair and recombination proteins [BR:
ppnm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LV28_00885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DUF7125
DnaB_C
AAA_22
GvpD_P-loop
AAA_16
ChlI
Lon_C
AAA_24
nSTAND3
RecA_N
nSTAND_NTPase5
AAA_14
AAA
SLFN-g3_helicase
NTPase_1
CobU
NACHT
AAA_5
MCM
B12-binding
PAXNEB
Isochorismatase
DUF7129
AAA_28
AAA_29
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AIU25305
UniProt:
A0A378YAD7
LinkDB
All DBs
Position
complement(2988383..2989756)
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AA seq
457 aa
AA seq
DB search
MAKAKTVYICTECGGQTPKWAGQCPNCNGWNTLVESVAETSTGHRYQSLAKSTPVRKLAQ
IEAADVPRFSSGVSEFDRVLGGGLVAGGVVLIGGDPGIGKSTLLLQSLAHLARERRALYV
SGEESGAQIALRAQRLGLGAAGEGGGELDLLAEIQLEKILGAIESEKPDVVVIDSIQTIY
SEALTSAPGSVAQVRECAAQLTRSAKQSGVTVIMVGHVTKEGSLAGPRVLEHIVDTVLYF
EGDTHSSYRLVRAFKNRFGAVNELGVFAMTEKGLRGVANPSALFLSQHEQSVPGSCVLVT
QEGTRPLLVEVQALVDTAQVPNPRRLAVGLEQNRLAMLLAVMHRHAGIACFDQDVFLNAV
GGVKISEPAADLAVLLAIHSSLRNKPLPRGIVAFGEVGLAGEIRPSPRGQDRLKEAAKLG
FSIAIIPKANAPKQPIDGLEVHAVDRLEQAISVVAGL
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagccaagactgtctatatctgtaccgagtgcggcgggcagacgcccaagtgg
gcggggcaatgtcccaactgcaacggctggaataccctcgtcgagtcggtggccgaaacg
tcgaccggccaccggtaccagtcgctcgccaagagcacgccggtgcgcaagctcgcgcag
atcgaagcggccgacgtgccgcgattttccagcggtgtgagtgaattcgaccgggtgctc
ggcggcgggctcgtcgccggcggcgtggtgctgatcggcggcgatcccggaatcggcaag
tcgacgctgctgctccagtccctggcgcatctggcgcgcgagcgccgcgcgctttacgtg
agcggcgaagagtccggcgcgcagattgcgctgcgcgcgcagcgactgggcctcggtgcg
gcgggcgagggcggcggtgagctcgatctgcttgccgaaatccagttggagaagattctc
ggcgcgatcgaatcggaaaagccggatgtcgtggtgatcgattcgatccagaccatttac
tccgaagccctcacctcggcgcccggttcggtggcccaggtgcgcgagtgtgcggcccaa
ctcacacgcagtgcgaagcaaagcggcgtgaccgtcatcatggtcggccacgtgacgaag
gagggcagtctggccgggccacgcgtgcttgaacacatcgtcgacaccgtgctgtatttc
gaaggcgacacgcattcgtcctatcgcctcgttcgcgcgttcaagaatcgattcggcgcg
gtcaacgaactgggcgttttcgccatgacggaaaaagggctgcgcggggtggcgaatccg
tcggccctgttcctttcgcagcatgagcagagcgtgccgggctcctgcgtgctggtgacc
caggagggcacccgtccgctgctcgtcgaagtgcaggcgctggtggatacggcccaggtg
ccgaatccgcgtcgtctggcggtgggattggagcagaaccggctggcgatgttgctggcg
gtcatgcatcgtcacgccggcatcgcctgcttcgatcaggatgtgttcctcaatgccgtg
ggcggtgtgaagatttcggagccggcggccgacctggccgtgctgctggcgatccactcg
tcgctgcgcaacaagcccttgccgcgcggcatcgtcgcgtttggcgaagtcgggctggcc
ggggaaatccggccgagcccgcgggggcaggatcgtctcaaggaagccgcgaagctcggc
ttctcgattgccatcattccgaaggcgaacgcgcccaaacaacccatcgacggtcttgaa
gtgcatgccgtcgaccgtctggagcaggcgatttcggtcgtggccggattgtag
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