Pandoraea pnomenusa DSM 16536: LV28_00930
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Entry
LV28_00930 CDS
T03411
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppnm03036
]
LV28_00930
Chromosome and associated proteins [BR:
ppnm03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LV28_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
SMC_hinge
AAA_21
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIU25313
LinkDB
All DBs
Position
complement(2974981..2978496)
Genome browser
AA seq
1171 aa
AA seq
DB search
MRLTSIKLAGFKSFVDPTNFAVPGQLVGIVGPNGCGKSNIIDAVRWVLGESRASELRGES
MQDVIFNGSTARKQASRASVELVFDNSAGRAAGQWSQYAEIAVKRVLTRDGTSSYYINNL
PARRRDIQDIFLGTGLGPRAYAIIGQGMISRIIEAKPEELRVFLEEAAGVSKYKERRRET
ENRLQDTRENLTRVEDILRELGTNLEKLESQAVVANRFKDLQRDGEEKQQLLWLLRKNEA
QNEQERQQRAIESAQVDLEAQMARLRGSESDLETLRAAHYTATDAVQAAQSAMYEANSEV
SRLEAEIRYVVESRNRVQAQLAALTSQREQWQARCAQSEEALALAEEELVIAEERAATAQ
DQAAEQNDALPALESRWRDAQNLLNEQRSEIAQVEQSLKLEAAHQRNADQALQQLQQRQE
RLQGEARGLDKPDEAELEMQRAELAEHQAMLEDAQAELAEAQERLPRLEAERAEAQARVQ
SEAATIAQLEARLSALKQLQESVQTEGKVQPWLDKHELAQLPRLWKKLHIEPGWENALES
VLRERLAALEISNLDWVKAFASDAPPAKLAFYSPPPAARPPEAPASLRPLLSLLRIDDPG
LRAVLQEWLGHTYVADDLAQAMTARAQLPEGASIVVKAGHQVTRVGVQLYAADSEQAGLL
ARQQEIENLGKQLRAQALLSDEAKSAAVRAEAAYSQAAQSLTEVRGRAERATQRVHALQL
DVLKLTQAYERYNARSSQIDEELREIAAQIEEQLAMRAESEANFEHSDARLAELQATFED
GQLEFESLDSQLSDARNRARELERLAQDATYGQKGIASKIDEHRRSIQTALEQAERLVVS
IEQAQAELAQITEQTAENGLQDALELRAEKEEILGAARMELEALTQKLRQSDEERLAAER
GLQPLRDRITELQLKEQAARLNREQFAEQLTTAQVDEEALSAKLTADMKPSYLQGEVTRI
NNAINALGPVNMAALEELETARERKVFLDAQSADLNDAIETLEGAIRKIDEETRVLLQGT
FDEVNKHFGELFPMLFGGGQAKLIMTGDEILDAGVQVMAQPPGKKNSTIHLLSGGEKALT
AIALVFGMFQLNPAPFCLLDEVDAPLDDANTERYAKMVARMSDRTQFVFISHNKIAMEMA
NQLIGVTMQEQGVSRIVAVDMESAINLAEIA
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtctgacatccatcaaactcgctggcttcaagtcgttcgtcgatccgacgaatttt
gcggtgcccggtcaactggtcggcattgtcggcccgaacgggtgcggcaagtccaacatc
atcgacgccgtgcgctgggtgctcggcgagtcgcgcgcctcggagctgcgcggcgaatcg
atgcaggacgtgattttcaacgggtcgaccgcccgcaagcaggcaagccgcgccagcgtc
gagctcgtgttcgacaacagcgccggacgtgccgccgggcagtggagccaatacgccgag
atcgccgtcaagcgtgtgctcacgcgcgacgggacctccagctactacatcaacaatctc
ccggcgcgtcgccgcgacatccaggacatcttcctcgggaccggcctcgggccgcgcgcc
tacgccatcatcgggcagggcatgatctcgcgcatcatcgaggccaagccggaagaactg
cgcgtattcctcgaagaagccgcgggtgtctccaagtacaaggaacgacgccgcgagacc
gagaatcgtctgcaggacacgcgtgagaacctcacccgcgtggaagatatcctgcgcgaa
ctcggcaccaacctcgaaaagctggaatcgcaggccgtcgtggccaatcgattcaaggac
ttgcagcgcgacggcgaagagaagcagcaactgttgtggctgttgcgcaagaacgaggcc
cagaacgaacaggaacgccagcaacgcgccatcgagtcggcacaggtcgacctggaggcg
cagatggcgcgtttgcgcgggtcggagtccgacctcgagacgctgcgcgccgcgcattac
accgccaccgatgccgtgcaggccgcccagagcgccatgtacgaggcgaattcggaggtg
agccgcctcgaagcggagatccgttacgttgtggagtcgcgcaatcgcgtgcaggcgcaa
ctggcggcgctgacctcgcaacgcgaacagtggcaggcccgctgtgcgcaatcggaagag
gcgctggcccttgccgaggaagaactggtcatcgcggaggagcgggcggcgacggcccag
gatcaggcggccgaacagaacgacgccctgcctgcactggagtcacgctggcgcgacgcg
cagaacctgctcaacgagcagcgcagcgagatcgcacaggtcgagcagagcctgaaactc
gaagccgcgcaccaacgcaacgccgaccaggccctgcagcaactgcagcagcgtcaggag
cgcttgcaaggtgaggcgcgtgggctcgacaagcctgacgaggccgagctggagatgcag
cgcgccgaactcgccgaacatcaggcgatgctcgaggatgcgcaggccgagcttgccgag
gcgcaggaacggctgccgcgtctggaggcggagcgcgccgaggcgcaggcccgggtccag
tccgaggcggcgaccatcgcgcagctcgaggctcgcctgagtgcgctcaagcagcttcag
gaaagcgtgcagaccgagggcaaggtgcagccgtggctcgacaagcacgagctggcgcaa
ctgccgcgactttggaagaaactgcatatcgagccgggttgggaaaacgcgctcgaatcg
gtactgcgcgagcgccttgccgcgctggaaatcagcaacctcgactgggtgaaggccttc
gcgagcgacgctccgccggccaagctggcgttctactcgccgccgccggccgcgcgacca
ccggaggcgccggcctcgctgcgtccgctgctctcgctgttgcgcatcgacgatccgggc
ctgcgcgccgtgttgcaggaatggctcggtcacacatacgtcgccgacgacctcgcacag
gcgatgacggcccgcgcgcagttgcccgaaggggcatcgattgtcgtcaaggccgggcat
caggtcacccgcgtgggcgtgcagctatatgccgccgactccgagcaggccggtttgctc
gcgcgtcagcaggaaatcgagaatctcggcaagcaactgcgcgcgcaggcgctgctctcg
gacgaagccaagtcggcggccgtgcgtgcggaagccgcctacagccaggccgcccagtcg
ctcacggaggtgcgcgggcgcgctgagcgcgccacgcagcgcgtgcatgcgttgcagctg
gacgtactcaagctgactcaggcctacgagcgctataacgcgcgcagctcgcagatcgac
gaggaactgcgcgaaatcgcggcccagatcgaagagcaactggccatgcgcgccgagtcg
gaagcgaacttcgagcacagcgatgcccggctggccgagttgcaggccactttcgaagac
ggtcagctcgagttcgaatcgctcgacagtcaactgtccgacgctcgcaatcgtgcgcgc
gagctcgaacgtctcgcacaggacgcgacttacgggcagaaagggatcgcgagcaagatc
gacgagcatcgccgcagtattcagacggcgctggagcaggccgagcgtctggtcgtttcg
atcgagcaggcgcaggccgagctcgcgcaaatcaccgagcagacagcggagaacggcttg
caggacgcgctggagcttcgcgccgagaaggaagagattctcggggccgcccgcatggag
ctggaagccctcacgcagaagctgcgtcaaagcgacgaggagcgtctggcggcggagcgc
gggttgcaaccgctgcgcgaccgcatcacggaattgcagctcaaggagcaggccgcgcgc
ctgaaccgcgagcagttcgccgagcagctcacgaccgcgcaggtcgacgaagaggcattg
tcggccaagctcacggcggatatgaagccgtcgtatctgcagggcgaagtcacgcgcatc
aacaacgccatcaacgcgctcggcccggtcaacatggcggcgctcgaggaactggaaacg
gcgcgcgagcgcaaggtcttcctcgacgcccagtcggccgatctgaacgacgccatcgaa
acgctcgaaggcgcgattcgcaagatcgacgaagagacgcgcgtgctgctgcaaggtacg
ttcgacgaagtgaacaagcatttcggcgaactgttcccgatgctgttcggcggcggccag
gcaaagctcatcatgaccggcgacgaaattctcgacgccggcgtgcaggtgatggcgcag
ccgccaggcaagaagaactccacgattcatttgctgtctggtggggagaaggcgcttacc
gccattgcgctcgtgttcgggatgttccagctcaacccggcgccgttctgtctgctggac
gaggtggacgcgccgctcgatgacgccaacaccgagcgctacgccaagatggtggcgcgc
atgtcggaccgcacccaattcgtatttatttcgcacaacaaaatcgcgatggaaatggct
aatcagctcatcggcgtcaccatgcaggaacaaggggtgtcgcggatcgtggcggtggac
atggagtcagcgatcaatctggccgagatcgcctga
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