Pandoraea pnomenusa DSM 16536: LV28_01295
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Entry
LV28_01295 CDS
T03411
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppnm03032
]
LV28_01295
03036 Chromosome and associated proteins [BR:
ppnm03036
]
LV28_01295
03400 DNA repair and recombination proteins [BR:
ppnm03400
]
LV28_01295
DNA replication proteins [BR:
ppnm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LV28_01295
Chromosome and associated proteins [BR:
ppnm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LV28_01295
DNA repair and recombination proteins [BR:
ppnm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LV28_01295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
AIU25379
UniProt:
A0A378YB76
LinkDB
All DBs
Position
2892311..2892589
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AA seq
92 aa
AA seq
DB search
MNKQELIDAVAGATGASKAQTGETIDTLIEVIKKAVAKGDTVQLIGFGSFGSGKRAARTG
RNPKTGEAIKIPAAKTVKFTAGKAFKDAVNKK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaacaggaactgatcgacgccgtcgccggcgctacgggtgccagcaaggctcaa
accggcgagaccatcgatacgctaatcgaggttatcaagaaagccgtcgccaagggtgat
acggttcagttgatcggcttcggctcgttcggttcgggcaagcgtgccgcgcgtaccggc
cgcaacccgaagaccggcgaagcgatcaagatcccggccgccaagaccgtgaagttcacg
gctggcaaggcgttcaaggacgctgtgaacaagaagtaa
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