KEGG   Pandoraea pnomenusa DSM 16536: LV28_01295
Entry
LV28_01295        CDS       T03411                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ppnm03032]
    LV28_01295
   03036 Chromosome and associated proteins [BR:ppnm03036]
    LV28_01295
   03400 DNA repair and recombination proteins [BR:ppnm03400]
    LV28_01295
DNA replication proteins [BR:ppnm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LV28_01295
Chromosome and associated proteins [BR:ppnm03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LV28_01295
DNA repair and recombination proteins [BR:ppnm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LV28_01295
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG
Other DBs
NCBI-ProteinID: AIU25379
UniProt: A0A378YB76
LinkDB
Position
2892311..2892589
AA seq 92 aa
MNKQELIDAVAGATGASKAQTGETIDTLIEVIKKAVAKGDTVQLIGFGSFGSGKRAARTG
RNPKTGEAIKIPAAKTVKFTAGKAFKDAVNKK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaacaggaactgatcgacgccgtcgccggcgctacgggtgccagcaaggctcaa
accggcgagaccatcgatacgctaatcgaggttatcaagaaagccgtcgccaagggtgat
acggttcagttgatcggcttcggctcgttcggttcgggcaagcgtgccgcgcgtaccggc
cgcaacccgaagaccggcgaagcgatcaagatcccggccgccaagaccgtgaagttcacg
gctggcaaggcgttcaaggacgctgtgaacaagaagtaa

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