Pandoraea pnomenusa DSM 16536: LV28_01425
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Entry
LV28_01425 CDS
T03411
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_01425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_01425
Transporters [BR:
ppnm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LV28_01425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
TAT_signal
OpuAC
Motif
Other DBs
NCBI-ProteinID:
AIU25403
UniProt:
A0A378YD95
LinkDB
All DBs
Position
complement(2861216..2862298)
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AA seq
360 aa
AA seq
DB search
MSHSHDPHNPSRRRLMQMAGATALATALPLAASRTAFAQARQLIVSDPGGPYTSAYRRAF
YDPFEKATGIKVVSVARDSQPVAQFAAMVQTKNFVWDVTTLTLSADIPYLESKGFLEPVG
MKAADFPGIMPEAVTPDWLGVDVYSTVLAYRTDKFPKEAPQTWADFWDVKRFPGRRSLRR
SPLDTLEQALMADGVPIDKLYPLDLDRAFKSLDRIKPHINLWWTSGAQAMQAIQSGDVDM
MSTWNGRAQAAIDNKAPVKIVWNQGLYSIEGWGIPKGTPRAEFAKQFVRFCGDPARQALI
TQDLAYGPTNLKAFDGIPKDRVPLLPTAPANLKGMRLPSPQWWAENRTKATERFNAWLLS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgtcccactcgcatgacccgcacaatccgtcccgccgccgtctgatgcaaatggctggc
gccaccgcgctggccaccgccttgccgctggccgcctcgcgcaccgccttcgcgcaggcg
cgccagttgatcgtctccgacccgggggggccgtacacctcggcttaccgccgtgcgttc
tacgacccgttcgagaaggccaccggcatcaaggtggtgagtgtggcgcgtgattcgcag
ccggtggcgcagtttgccgccatggtgcagacgaagaacttcgtgtgggacgtgacgaca
ctcacgctctccgccgacattccgtatctcgagtcgaagggctttctcgagcccgtcggc
atgaaggccgccgacttcccagggatcatgcccgaggccgtcacgcccgactggctcggt
gtcgacgtgtattcgaccgtgctggcgtatcgcaccgacaagttccccaaggaagcgccg
cagacctgggccgacttctgggacgtgaagcgcttccccggccgccgctcgctgcgtcgc
agtccgctcgacacgctcgaacaggcgctcatggccgacggggtgcccatcgacaagctg
taccccctcgatctcgaccgcgcgttcaagtcgctcgacaggatcaagccgcacatcaat
ctctggtggacgtccggcgcccaggccatgcaggccatccagagcggcgacgtggacatg
atgtcgacgtggaacggtcgcgcgcaggcggccatcgacaacaaggcgccggtgaagatc
gtgtggaaccaggggctgtattccattgaggggtggggcattccgaagggcaccccgcgt
gccgaattcgcgaagcagttcgtgcgcttctgcggcgatccggcgcgtcaggcgctcatt
acgcaggacctcgcgtacggtccgaccaacctgaaggcgttcgacggcattccgaaagat
cgcgtaccgctgttgcccaccgcgccggccaacctgaagggcatgcgtttgccgagcccg
cagtggtgggccgagaaccgcacgaaggccaccgagcgcttcaacgcctggctgttgtcg
taa
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