Pandoraea pnomenusa DSM 16536: LV28_02015
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Entry
LV28_02015 CDS
T03411
Name
(GenBank) hypothetical protein
KO
K21089
MerR family transcriptional regulator, activator of the csg genes
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppnm03000
]
LV28_02015
Transcription factors [BR:
ppnm03000
]
Prokaryotic type
Helix-turn-helix
MerR family
LV28_02015
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR
PLU-1
RE_SinI
DUF6707
Motif
Other DBs
NCBI-ProteinID:
AIU25489
UniProt:
A0A378YD21
LinkDB
All DBs
Position
complement(2720944..2721924)
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AA seq
326 aa
AA seq
DB search
MEDTVNSVRRYRSGEAAKLVDMPAATLRIWEQRYGVISPPTSASGQRLYSDVDVNRLRTI
KSLVDKGHAISAIAHLDNAQLGRLASGAAVAAASVDASHGANLFIVGFGEGVSIELPEGV
THQAFHQAEEIPVAEDSSGTPRGMVVRVEALHEDTVMSVVAAARRAHCDHVLVVYAFGTR
RAVDLARLEGMQLARTSDALLHAHDVLFDFVQSMAHKDGVGSSRARLWSRSPRRFDEATL
TRLAQQSTTIACECPKHLVELVMQIAAFERYSDECVSRSAADALLHQHLGDAANRAVALF
EDALAAIVEQEGWSVPAAAPRHMSED
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggaagacacggtgaattcagttcggcgttatcgaagtggcgaggccgcaaagctcgtc
gacatgccggccgccacgttgcggatctgggaacagcgatatggcgtgatttcgccgccc
acgagtgcctcggggcagcgtctttattccgacgtcgatgtgaaccgtctgagaacgatc
aagtcgctggtcgacaagggccacgcgatcagcgccatcgcgcatctcgacaacgcgcag
ttgggccgattggcgagtggcgccgccgtggccgccgcttcggtggacgcgtcgcacggc
gccaatctcttcatcgtgggctttggcgaaggcgtctcgatcgagttgcccgagggcgtc
acgcatcaggcatttcatcaagccgaagagattcctgtcgccgaagattcgagcggcacg
cctcgcggcatggtcgtgcgggtcgaggcgctgcacgaagacacggtgatgtccgtcgtc
gcggcggcgcgtcgggcgcattgcgatcacgtgcttgtcgtctacgcattcggcacgcgg
cgtgccgtcgatcttgcgcgccttgaaggcatgcagctcgcgcgcacgtccgatgccctg
ctccatgcccacgacgtacttttcgatttcgtgcagtcgatggcgcacaaggatggcgtc
ggctcgagtcgagcacggctctggtcaaggtcgccacgtcggttcgatgaagcgacgctg
acccgactggcgcaacagtcgacgacgatcgcttgcgaatgtccgaagcacctggtcgag
ttggtgatgcagatcgccgccttcgagcgctacagcgacgaatgcgtgtcgcgctccgcc
gccgacgccctgctccaccagcatctgggcgatgccgccaaccgtgccgtggcgctgttc
gaagacgcgctggccgcgattgtcgagcaagagggctggtcggtgccggcggccgctcca
cgccacatgtccgaagactga
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