Pandoraea pnomenusa DSM 16536: LV28_03545
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Entry
LV28_03545 CDS
T03411
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00061
Fatty acid biosynthesis
ppnm00071
Fatty acid degradation
ppnm01100
Metabolic pathways
ppnm01212
Fatty acid metabolism
ppnm02024
Quorum sensing
ppnm04146
Peroxisome
Module
ppnm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LV28_03545
00071 Fatty acid degradation
LV28_03545
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LV28_03545
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_03545
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ppnm01004
]
LV28_03545
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppnm04147
]
LV28_03545
Enzymes [BR:
ppnm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LV28_03545
Lipid biosynthesis proteins [BR:
ppnm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LV28_03545
Exosome [BR:
ppnm04147
]
Exosomal proteins
Exosomal proteins of breast milk
LV28_03545
Exosomal proteins of breast cancer cells
LV28_03545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ALR35887
LinkDB
All DBs
Position
complement(2382036..2383838)
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AA seq
600 aa
AA seq
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MMDQAVAQARVWLRAYPPGVPADIDVTRYTSLVQAFDEWVDKYRERVAFVSLGSEMTYAE
VARQAHAFAAWLQSQGVRKGERVALMMPNCFQYPICLFGTLIAGGVVVNVNPLYTVRELK
HQLVDSGARTLVVFENFAKTAQDAIAGTDVQQVLVTQIGDLLAPGANLKGRAVNFLMRHI
GRQVPPYDLPQAIPLRRALAQGAKHAPMPVPLMRDDLAFLQYTGGTTGVAKGAMLTHGNV
LANLLQTEAWAADQLNGDIEVNLSLLPMYHILSLTVNCLIFMSLGGRNILIANPRDVKKV
VYIIRNETFTGVTGVNTLFNGLLENADFCARDFSKLKLSLAGGMATQRAIAERWREVTGK
PIIEGYGLTECSPIVTMNPVDLAHMDTFEFTGSIGLPAPSTEVRFRREDGTWADLGEPGE
LCVRGPQVMRGYWQRPEETASTIDADGWLMTGDIGVMDERGYVRLIDRKKDMILVSGFNV
YPNEIEDVVMLHPGVREAAVVGVPDPIAGERVKLVVVARDPQLDADAILAHCRAHLTAYK
VPRIVEFRQGELPKTTVGKILRRELRGTHDESHSRAAHATTAPSDGRDSHAPTPANQGDK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcaagccgtagcgcaggcgcgcgtctggttgcgtgcctacccacccggcgtg
cccgccgatatcgacgtgacacgttacacgtcgctcgtgcaggcgttcgacgagtgggtc
gacaagtaccgcgaacgcgtcgcgttcgtgagcctcggcagcgaaatgacatacgcggaa
gtggcgcgtcaggcccatgcgttcgcggcgtggctgcaatcgcagggcgtgcgaaaaggc
gagcgcgtcgccttgatgatgccgaactgctttcaataccccatctgccttttcggcacg
ctcatcgcgggcggggtcgtcgtcaacgtcaatccgttgtacacggttcgcgaactgaag
catcaactggtcgacagcggcgcgcgcaccctcgtcgtgttcgagaacttcgcgaagacc
gctcaggacgcgattgccggcaccgacgtgcagcaggtcctcgtgacacagatcggcgat
ctgctcgcccccggcgccaatctgaagggacgcgccgtcaacttcctcatgcgacacatc
ggcaggcaggtccccccctacgatctgccgcaggcgatcccgctgcgtcgtgcgctcgcg
cagggcgcgaaacatgcgccgatgcccgtgccgctcatgcgcgacgatctcgcattcctc
cagtacacgggcggaacgaccggcgtggccaagggggcaatgctcacccatggcaatgtg
ctcgccaacctgttgcaaaccgaagcgtgggctgccgatcagctcaacggcgacatcgag
gtgaacctttcgctgttgccgatgtatcacatcctctcgctcacggtgaactgcctcatc
ttcatgagcctgggcgggcgcaacatcctcatcgcgaatccacgcgacgtgaagaaggtc
gtgtacatcattcgcaacgagaccttcaccggcgtgaccggcgtgaacacgctcttcaac
ggcttgctcgagaacgccgacttctgcgcgcgcgacttctcgaagctcaagctctcgctc
gcgggcggcatggccacgcagcgcgccattgccgagcgctggcgtgaggtgaccggcaag
ccgatcatcgagggctacgggctgaccgaatgctcgccgatcgtcacgatgaacccggtc
gatctcgcccatatggacacgttcgaattcaccggctccatcggactgccagcgccgtcg
accgaagtcaggtttcggcgcgaagacggcacgtgggccgatctcggcgagccgggcgag
ctgtgcgtgcgcggcccgcaggtcatgcgcggctactggcagcgccccgaggagaccgcc
agcaccatcgatgccgacggctggctgatgaccggcgacatcggcgtgatggacgagcgc
ggctatgtgcggctcatcgatcgcaagaaggacatgatcctcgtgtcgggcttcaacgtc
tatccgaacgagatcgaagacgtcgtgatgctccaccccggggtgcgcgaggcggcagtc
gtgggcgtgcccgacccgatcgcgggagagcgcgtgaaactcgtggtcgtggctcgcgat
ccgcagctcgatgccgatgcgatcctcgcgcactgccgcgcacacctgaccgcctacaag
gtgccgcgcatcgtcgaattccgccagggcgaactgcccaagacgaccgtgggaaagatt
ctgcggcgcgaactgcgcggcacgcatgacgaaagtcactcgcgcgctgcgcacgccacg
accgcaccgagcgacgggcgcgactcgcacgcgccgacacccgcgaaccagggagacaaa
tga
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