Pandoraea pnomenusa DSM 16536: LV28_04405
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Entry
LV28_04405 CDS
T03411
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LV28_04405
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppnm01007
]
LV28_04405
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppnm03016
]
LV28_04405
Enzymes [BR:
ppnm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
LV28_04405
Amino acid related enzymes [BR:
ppnm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LV28_04405
Transfer RNA biogenesis [BR:
ppnm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LV28_04405
Prokaryotic type
LV28_04405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
YpoC
Motif
Other DBs
NCBI-ProteinID:
AIU25884
UniProt:
A0A378YFI9
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All DBs
Position
2187718..2189625
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AA seq
635 aa
AA seq
DB search
MISVRLPDGSQRQYEAPLTVAQVAGSIGAGLAKAALAGRVDGKLVDTSYLIDRDVSLAIV
TDKDADGLDIIRHSTAHLLAYAVKELFPEAQVTIGPVIENGFYYDFAFHRAFTPEDLEAI
EKKMHELAKKDEPVTREVLSRDDAVRLFMSMGEKYKAEIIESIPATEQIGLYREGKFVDL
CRGPHVPSTGKLKVFKLMKVAGAYWRGDAKNEQLQRIYGTAWTKKEDQDAYLHMLEEAEK
RDHRKLGRALDFFHMQEEAPGLVFWHPKGWTLWQQVEQYMRRVYRNNGYQEVKAPQILDR
SLWEKSGHWENYKDNMFTTESESRAYALKPMNCPGHVLIFNSSLHSYRDLPLRYGEFGQC
HRNEPSGGLHGLMRVRGFTQDDGHIFCTEDQILEECVNYTALLHAVYKDFGFTDMIYKVA
TRPEHRVGSDENWDKAEFALMESLRRSGCEFVIAEGDGAFYGPKIEYTLKDALGRQWQCG
TMQVDFSMPERLDAEYVAEDNSRKRPVMLHRAILGSLERFIGILIEHHAGAMPVWLAPEQ
VIVMNVSEKTADYAQEVTKKLKEQGLRARSDLRNEKISYKIREHSLQKVPYLVVVGDKEQ
EGNTVAVRARGGVDLGVMPVDALIERLAQACATFQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgatttcggtacgtttgcctgacggttcgcaacgccagtacgaggccccgctcacggtg
gcgcaggtcgccggctcgatcggcgcgggcctggccaaggccgccctggccggtcgcgtc
gatggcaagctggtcgatacgtcctacctgatcgatcgcgacgtgagtcttgccatcgtg
accgacaaggatgccgacggtctcgacatcattcgccactcgacggcgcacttgctggcc
tacgccgtcaaggagctgttcccggaggcgcaggtgaccatcggtccggtcatcgaaaac
ggcttttactacgatttcgccttccatcgcgccttcacgccggaagatctcgaggcgatc
gagaagaagatgcacgaactcgccaagaaggacgagccggtcacgcgcgaggtgctctcg
cgtgacgacgccgtgcgtctgttcatgtcgatgggcgaaaagtacaaggccgagatcatc
gaatcgatccccgccacggagcagatcggcctgtaccgcgaaggcaagttcgtcgacctt
tgtcgcggcccgcacgtgccgtcgacgggcaagctcaaggttttcaagttgatgaaggtc
gccggcgcctattggcggggcgatgccaagaacgagcaattgcaacgcatttacggcacg
gcctggacgaagaaggaagaccaggatgcgtatctgcatatgctcgaagaggcggaaaag
cgcgatcaccgcaaactcggccgtgcgctggacttcttccacatgcaggaagaagcgccg
ggtctggtcttctggcaccccaagggctggacgctctggcaacaggtcgagcagtacatg
cgccgcgtctaccgcaacaacggttaccaggaagtgaaagcgccgcagattctcgatcgc
tcgctctgggaaaagtcggggcactgggagaactacaaggacaacatgttcacgacggaa
tcggagagccgcgcctacgcgctcaagccgatgaactgtccgggacacgttctgatcttc
aactcgtcgctgcacagctaccgcgatctgccgctgcgctatggtgagttcggtcaatgt
caccgcaatgagccgtcgggtggtctgcacggcctgatgcgcgtgcgtggcttcacacag
gacgacggtcatattttctgtacggaagaccagattctcgaagagtgcgtgaattacacg
gcgctgctgcacgccgtgtacaaggacttcggcttcacggacatgatctacaaggtcgca
acgcgccccgaacatcgcgtgggttccgacgagaactgggacaaggcggagttcgcgctg
atggagtcgctgcgtcgctcgggttgcgagttcgtgatcgccgagggggatggggcattc
tacgggccgaagatcgagtacacgctcaaggatgcgctcggtcgccagtggcagtgtggc
acgatgcaggtcgatttctcgatgccggagcgcctggacgccgagtacgtggcggaggac
aacagccgcaagcgcccggtcatgcttcaccgcgcgatcctgggttcgctggagcgcttt
atcggcattctgatcgagcaccatgctggtgcaatgccggtctggctggcgccggagcag
gtgatcgtgatgaatgtgtcggaaaaaaccgccgattatgcccaggaagtgacgaaaaag
ttgaaagaacaagggcttagggctcggagcgatttgcgcaacgagaaaattagctataaa
atacgcgagcactcgttgcagaaagttccctatctcgtggtagtgggggacaaggagcaa
gagggtaatacggtagccgtgcgtgcccgtggcggcgtggatctgggtgtcatgcccgtt
gatgcgctcatcgaacgtcttgcgcaagcgtgcgcaacgttccaataa
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