Pandoraea pnomenusa DSM 16536: LV28_05280
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Entry
LV28_05280 CDS
T03411
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppnm03000
]
LV28_05280
Transcription factors [BR:
ppnm03000
]
Prokaryotic type
Helix-turn-helix
Other families
LV28_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS_4
AAA_5
PAS
AAA
PAS_8
AAA_16
Mg_chelatase
AAA_7
AAA_2
HTH_23
HTH_7
PAS_9
DUF6262
HTH_30
AAA_22
TIP49
NACHT
AAA_3
HTH_psq
nSTAND3
DUF815
Motif
Other DBs
NCBI-ProteinID:
AIU26034
LinkDB
All DBs
Position
complement(1998887..2000899)
Genome browser
AA seq
670 aa
AA seq
DB search
MIWAVGISKLGELYRDIVPDYTAVADVQIIDKGYEAVIDALARLPAGSVDGIVAAGSNGA
FLRERVALPVVLVKVTGFDVMHALARARRALPSPSPASRIALVSYARPAAEFERFKSAFH
LDIPQHAYHDAHDAEDLVHRLRDEGMEVIVGPGLVTELAERAGLTGVFLYSQDSVRAAFD
TALEVARFGRIEAQRRERLDTVLRHLHEGVAAVDLDGRVEAINASMAGMLGVNAIDAVGR
PLDAIAPALDISRTLESASAELEAIVSMAGKTWVVNRIPLLDQGTLTGALLTCQDSQAFA
RVDRSLRSRHRPRHLVARYRLDDLIGDSAAMTQVRALARRYAQTDSTVLVHGESGTGKEL
LAQGIHNASRRRDYPFVAINCAAFPETLLESELFGYEDGAFSGARRGGKAGLFETAHNGT
IFLDEIGEMPMPLQTRLLRVLQEREVLRLGATEPVPCDVRVIAATHRDLRQQVAAGLFRE
DLYYRLNILRMVLPPLRERMDDLPRLTPLFLERALARAGARMSVEALQASLLPLLATYRW
PGNVRELENLLERIAVVCADVVEAREIDRARLVEIAPELDPAGGAPLRIDAPASPDVPPT
HGGRQVGEPGVRQTGAAPLAQTGRARRAAEELARIRATLAACGGDRGAACEALGISRSTL
WRKLREHPGN
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
gtgatctgggcggtgggcatcagcaagctcggcgaactctatcgcgacatcgtgcccgat
tacacggccgtcgccgacgtccagatcatcgacaaaggctacgaagccgtgatcgacgcg
ctggcgcggctgcccgcgggcagcgtcgacggtatcgtcgcggcgggctcgaatggcgca
ttcctgcgcgagcgcgtcgcactgcccgtcgtgctcgtgaaagtcaccggcttcgatgtc
atgcacgcgctcgcccgggcgcgccgcgcactgccctcgccatcgcctgcgtcgcgcatc
gcgttggtgtcgtatgcacgcccggccgccgaattcgaacgcttcaagagcgcgtttcat
ctcgatatcccgcagcatgcctatcacgacgcgcatgacgccgaagacctcgtgcatcga
ctgcgcgacgaaggcatggaagtcatcgtcggccccggcctggtgaccgaactggccgag
cgcgcggggctcacgggcgtgtttctctattcgcaggactcggtgcgcgcggcgttcgac
acggcgctggaagtcgcgcgcttcggacgcatcgaagcgcagcggcgcgagcgtctcgac
accgtgctccgacatctgcacgaaggcgtggccgccgtcgacctcgatggccgggtggag
gcgatcaatgcgtcgatggccggcatgctcggcgtgaatgcgatcgacgccgtcggccga
ccgctcgacgccatcgcgccggcactggacatttcccgcaccctggagagcgcgagcgcc
gaactggaggcgatcgtttccatggcgggcaagacgtgggtcgtcaaccgcatcccgctg
ctggatcagggcacgctcacaggcgcgctcctcacgtgccaggactcgcaagcgtttgcg
cgtgtggaccgttcgctgcgttcgcgtcaccgcccgcgacaccttgtggcgcgctaccgg
ctcgacgatctgatcggcgactcggctgcgatgacgcaggtgcgcgcgctggcgcgccgc
tacgcccagacggattcgaccgtgcttgtgcacggcgagagcggcaccggcaaggaattg
ctcgcgcagggcatccacaacgccagtcgacgacgcgactatcccttcgtggcgatcaat
tgcgcggcgtttcccgagacgctgctcgagagcgagctcttcggctatgaagacggcgcg
ttctccggcgcgcggcgcggcggcaaggccggcctgttcgagacggcccacaacggcacg
atctttctcgacgaaatcggcgaaatgccgatgccgctgcaaacgcgcctgctgcgcgtg
cttcaggagcgcgaggtgctgcggctcggcgcgaccgaaccggtgccgtgcgacgtgcgc
gtgatcgccgcaacgcaccgcgaccttcggcagcaggtggccgccggtctgttccgcgaa
gacctgtattaccggctcaacatcctgcgcatggtgctgccgccgttgcgcgagcgcatg
gacgacctgccacgcctcaccccgctctttctggagcgcgccctcgcgcgcgccggcgcg
cgcatgagcgtcgaagccctgcaggcgtcgctactgccactgctggcgacttatcgctgg
cccggcaatgtgcgcgaactggaaaatctgctcgagcgcattgcggtcgtctgcgccgat
gtggtggaggcgcgtgagatcgatcgcgcacggctggtcgagattgcaccggaactcgat
ccggcgggtggcgcccccctgcgcatcgatgcgccggcgtcgcccgatgttccccccacg
cacgggggacggcaagtcggcgagcccggagtgcgtcagaccggcgccgcgccactggcg
cagaccgggcgcgcccgacgcgccgccgaggaactggcacgcattcgcgccacgctcgcg
gcgtgcggcggcgaccggggcgccgcctgcgaggcgctgggcatcagccggtcgacgcta
tggcgaaagctgcgcgagcatcccggcaactga
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