Pandoraea pnomenusa DSM 16536: LV28_05550 Help Entry LV28_05550        CDS       T03411                                  Name (GenBank) RNA polymerase subunit sigma   KO K03086   RNA polymerase primary sigma factor Organism ppnm  Pandoraea pnomenusa DSM 16536 Pathway ppnm02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ppnm00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     LV28_05550  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ppnm03021]     LV28_05550 Transcription machinery [BR:ppnm03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      LV28_05550 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r1_1 Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 GSH-S_ATP SPO22 Motif Other DBs NCBI-ProteinID:  AIU26079 LinkDB All DBs Position 1935483..1937558 Genome browser AA seq 691 aa AA seqDB search MPPVQKTRGRAAKTAAPEAQGVAENTYDQPVNEDQTKVEKQKARDRRAKEKALLKDAFSS HQPGTAEELEERRGKLKALIKLGKERGFLTFAEINDHLPDELVESEALEGVIGTFNDMGI AVYEQAPDAETLLLNDNAPNAASDDEVEEEAEAALSTVDSEFGRTTDPVRMYMREMGTVE LLTREGEIEIAKRIEEGLKHMVQAISACPTTIAEILAMAEKVEREEMRIDEVVDGLIDPN AEAEAAAASSDDEDFDADADAEAEEEEEEAEEEDDSNSGAGASAAQVEQLKRDSLAKFAV IADWFGKMRRAFEKEGYQSKPYVKAGEAIQAELMTIRFTARTVERLCDTLRSQVDEVRNI ERAILNIVVDKCGMPRADFVSRFPGNETNLDWIYTVVADNKAYSSVVERNVPAVQELQQK LIDLQARVVLPLAELKDVNRKMSEGERRARKAKREMTEANLRLVISIAKKYTNRGLQFLD LIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKM NRISRQILQETGVEPDPATLAEKMEMPEDKIRKIMKIAKEPISMETPIGDDDDSHLGDFI EDTGTVAPADAALHGSMRDVVKDVLDSLTPREAKVLRMRFGIEMSTDHTLEEVGKQFDVT RERIRQIEAKALRKLRHPSRSDKLKSFLEGN NT seq 2076 nt NT seq  +upstreamnt  +downstreamnt gtgccgcccgtccaaaagacgcggggccgtgccgcgaagactgctgctccggaggcgcaa ggcgtcgcagagaatacttacgatcaacccgtgaacgaagatcagaccaaagtggaaaag cagaaggcgcgtgatcgccgggcaaaagagaaagcactgctcaaggacgcattttcctcg caccagcccggtacggccgaggaacttgaggagcgtcgtggcaaactgaaggcactgatc aagctgggcaaggagcgaggcttcttgacctttgccgagatcaatgaccacctgcccgac gagctggtggaaagcgaggcgctcgagggcgtgatcggcacgttcaacgacatgggcatt gctgtgtacgagcaggcgcccgatgccgaaacgctgttgctcaacgacaacgcgccgaac gccgcgtcggacgacgaagtcgaggaagaagccgaagcggctttgtcgaccgtcgactcc gagtttggtcgcacgaccgacccggtgcgtatgtacatgcgcgaaatggggacggtcgag ctgctgacgcgcgaaggggaaatcgagatcgccaagcgcatcgaggaagggctcaagcac atggtgcaggccatttccgcgtgcccgacgacgatcgccgagatcctggcgatggccgag aaggtcgagcgtgaggagatgcgcatcgacgaggtggtcgatggcctgatcgatccgaat gcggaagccgaggcggcggccgcttcctccgacgacgaggacttcgacgccgatgccgac gccgaggcggaagaagaggaagaagaagccgaagaggaagatgacagcaacagtggcgcg ggtgcttcggctgcgcaggtcgagcagctcaagcgcgactcgctggccaagttcgccgtg attgccgactggtttggcaagatgcgtcgtgcgttcgagaaggaaggctaccagtccaag ccgtacgtgaaggctggcgaggcgatccaggccgagttgatgacgatccgctttacggcg cgcacggtcgagcgtttgtgcgacacgcttcgttcgcaggtggacgaagtgcgcaacatc gagcgtgcgatcctgaacatcgtggtcgacaagtgcggcatgccgcgcgcggatttcgtg tcgcgtttcccgggcaacgaaacgaatctcgactggatttacacggtggtggccgataac aaggcgtacagctcggtggtcgagcgcaacgtgccggccgtgcaggagcttcagcaaaag ctgatcgacctgcaggcgcgtgtggtactgccgctggccgaattgaaggacgtgaaccgc aagatgtcggaaggcgagcgccgtgcccgcaaggccaagcgtgagatgaccgaagccaac ttgcgtctcgtgatttcgattgcgaagaagtacacgaaccgtggcttgcagttcctggat ctgatccaggagggcaacatcggcctgatgaaggcggtggacaagttcgaatatcgtcgt ggttacaagttctcgacgtacgcgacgtggtggatccgccaggccatcacgcgttcgatc gcggaccaggcgcgtaccattcgtattccggtgcacatgatcgaaacgatcaacaagatg aaccggatctcgcgtcagattctgcaggagaccggtgtcgagccggatccggcgacgctg gccgagaagatggaaatgccggaggacaagatccgcaagatcatgaagatcgcgaaggag ccgatctccatggaaacgccgatcggtgacgacgacgattcgcacttgggtgatttcatc gaggatacgggcacggtagcgcctgctgacgccgcattgcatggtagtatgcgcgacgtc gtgaaggacgtgctcgattcgctgacgccgcgtgaggcgaaggtgctccgcatgcgtttc ggcatcgagatgagcacggaccacacgctcgaggaagtgggcaagcagtttgacgtgacg cgtgagcgtattcgtcagattgaagccaaggcgctgcgcaagctgcgtcacccgagccgt tccgacaagctcaagtcgttcctcgaaggcaattga

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