Pandoraea pnomenusa DSM 16536: LV28_06315
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Entry
LV28_06315 CDS
T03411
Name
(GenBank) isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00020
Citrate cycle (TCA cycle)
ppnm00480
Glutathione metabolism
ppnm00720
Other carbon fixation pathways
ppnm01100
Metabolic pathways
ppnm01110
Biosynthesis of secondary metabolites
ppnm01120
Microbial metabolism in diverse environments
ppnm01200
Carbon metabolism
ppnm01210
2-Oxocarboxylic acid metabolism
ppnm01230
Biosynthesis of amino acids
ppnm04146
Peroxisome
Module
ppnm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppnm_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LV28_06315
09102 Energy metabolism
00720 Other carbon fixation pathways
LV28_06315
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LV28_06315
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LV28_06315
Enzymes [BR:
ppnm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
LV28_06315
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Gene cluster
GFIT
Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
AIU26208
UniProt:
A0A378YG68
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All DBs
Position
complement(1758770..1761010)
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AA seq
746 aa
AA seq
DB search
MSTQQSSIIYTLTDEAPLLATGAFLPIIRTFTAPAGVAIETSDISVAGRILGEFPEFLTE
EQRVPDNLAELGRLTQDPDTNIIKLPNISASVFQLQSAIKELQSKGYKVPDYPEDPKTDE
EKAIQKRYSKCLGSAVNPVLREGNSDRRAPLAVKNYAKKHPHSMGEWSMASRTHVAHMKH
GDFYHGEKSMTIDKACDVRMELVTKSGKTIVLKPKVSLLDGEIIDSMFMSKKALCEFYEE
QMEDARKTGVMFSLHVKATMMKVSHPIVFGHAVKIFYKEAFEKHGKLFDELGVNVNNGLV
NLYEKIEALPSTQREEIIRDLHACHEHRPELAMVDSAKGISNLHAPNDVIVDASMPAMIR
LGGKMWGADGRPKDTKAVIPESTFARIYQEIINFCKTNGAFDPTTMGTVPNVGLMAQKAE
EYGSHDKTFEIVEDGVANIVNIATGEVLLSQNVEAGDIWRMCQVKDAPIRDWVKLAVNRV
RNSGMPAVFWLDPYRPHEAELIKKVETYLKDHDTTGLDIQIMSQVRAMRYTLERVIRGLD
TISVTGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVKQLIEEN
HLRWDSLGEFLALAVSLEDLGIKTGNNRAKILAKTLDAATGKLLDNNKGPSPKTGELDNR
GSQFYLSMYWAQELAEQKEDAELAQRFAPLAKRLAENEKTIVAELAEVQGKPADIGGYYK
PDFDKLEQVMRPSKTFNAALASVATA
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgcagcaatccagcatcatctacaccctgaccgacgaagcaccgcttctggcc
accggcgccttcctcccgatcattcgcacgttcaccgcgccggccggcgtggcgatcgag
acgagcgacatctcggtggcaggtcgtatcctcggcgaattccccgaattcctgacggaa
gaacagcgcgtgccggacaacctcgccgagttgggccgcctcacgcaggatccggacacc
aacatcatcaagctgccgaacatcagcgcttcggtgttccagttgcagagcgccatcaag
gagctccaatcgaagggctacaaggtgccggactatccggaagacccgaagaccgacgaa
gagaaggccatccagaagcgctactcgaagtgcctgggctcggccgtgaacccggtgctg
cgcgaaggcaattcggatcgccgcgccccgctggccgtgaagaactacgccaagaagcat
ccgcacagcatgggcgaatggagcatggcttcgcgcactcacgtggcgcacatgaagcac
ggcgacttctaccacggcgaaaagtcgatgacgatcgacaaggcttgcgacgtgcgcatg
gaactcgtgacgaagagcggcaagaccatcgtgctcaagccgaaggtctcgctgctcgac
ggcgaaatcatcgacagcatgttcatgagcaagaaggcgctgtgcgagttctacgaagaa
cagatggaagacgcccgcaagaccggcgtcatgttctcgctgcacgtgaaggccaccatg
atgaaggtctcgcacccgatcgtgttcggccacgccgtgaagatcttctacaaggaagcc
ttcgagaagcacggcaagctgttcgacgaactgggcgtgaacgtcaacaacggcctcgtg
aacctgtacgagaaaatcgaggcgctgccgagcacgcaacgtgaagagatcatccgcgat
ctgcacgcctgccacgagcaccgtccggaactggcgatggtcgactcggccaagggcatc
tcgaacctgcacgcaccgaacgacgtgatcgtcgatgcctcgatgccggccatgatccgc
ctgggcggcaagatgtggggtgccgacggccgtccgaaggacaccaaggccgtgatcccg
gagagcacgttcgcccgcatttaccaggaaatcatcaacttctgcaagacgaacggcgca
ttcgacccgaccaccatgggcacggtgccgaacgtcggcctcatggcgcagaaggcagaa
gagtacggctcgcacgacaagacgttcgaaatcgtcgaagacggcgtggcgaacatcgtc
aacatcgccacgggcgaagtgctgctctcgcagaatgtagaagccggcgacatctggcgc
atgtgccaggtcaaggacgccccgatccgcgactgggtaaagctcgcggtgaaccgcgtt
cgcaactcgggcatgccggccgtcttctggctcgacccgtaccgtccgcacgaagccgaa
ctgatcaagaaggtcgagacgtacctgaaggaccacgacaccaccggcctcgatatccag
atcatgtcgcaagtgcgcgccatgcgttacacgctcgagcgcgtgatccgcggcctggac
accatttcggtgaccggcaacattctgcgcgactacctgaccgacctcttcccgatcatg
gagctgggcaccagcgccaagatgctgtcgatcgtgccgctgatggccggtggcggcatg
tacgaaacgggcgccggcggctcggcaccgaagcacgtcaagcaactgatcgaggagaat
cacctgcgttgggactcgctgggtgaattcctggcgctggccgtgtcgctggaagacctc
ggtatcaagacgggcaacaaccgcgccaagatcctcgccaagacgctcgacgcggcaacc
ggcaagctgctggacaacaacaagggcccgtcgcccaagaccggcgagctcgacaatcgc
ggcagccagttctatctgtcgatgtactgggcacaggaactcgccgagcagaaggaagac
gccgagctggcccagcgcttcgcgccgctggccaagcgactggccgagaacgagaagacg
atcgtggccgaactcgccgaagtacaaggcaagccggccgacatcggtggctactacaag
cccgacttcgacaagctcgagcaagtcatgcgcccgagcaagacgttcaacgccgcgctg
gcaagcgtcgcgacggcgtaa
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