Pandoraea pnomenusa DSM 16536: LV28_06680
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Entry
LV28_06680 CDS
T03411
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_06680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_06680
Transporters [BR:
ppnm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LV28_06680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
AIU26269
UniProt:
A0A378YGI7
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All DBs
Position
1665687..1666700
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AA seq
337 aa
AA seq
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MKLWITRAARTLALCTLLGAGAAQAQQTAICYNCPPEWADWAGQVKAIAQDTGIRVPLDN
KNSGQAVAQLIAEQKAPVADIVYLGITSAIEAAKKGLLAPYKPANWDQVPANLKDPNGMW
TTIHSGTVGFFVNRDALEGKPVPRSWADLLKPEYRGMVGYLDPSSAFAGYAAAIAANQAL
GGSMDNFGPAIGYFQKLKANAPIVPKQTAYARVLSGEIPILIDFDFNAYRAIYKDRANVQ
FVIPMEGTVSLPYVIALVRGAPHADNGKKVIDYTLSDKGQAHWAHAFLRPVRANTMPADV
AAKFLPATDYARVKPVDLQKLAAQQDAFGQQYLKNVR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttggattacccgcgccgcacgcacgctggcgctttgcaccttgctcggcgct
ggcgccgcgcaggcccagcagaccgccatctgttacaactgcccgccggagtgggcggac
tgggctggtcaggtcaaggcgattgcacaggacaccggcattcgcgtgccgctcgacaac
aagaactccggtcaggcggtcgcgcagctcatcgccgagcagaaggcgccggtggccgac
atcgtgtacctggggatcacgtccgcgatcgaagcggccaagaagggtctgctcgcgccg
tacaagcccgccaactgggatcaggtgccggccaatctgaaggacccgaacggcatgtgg
accacgatccactcgggcacggtgggtttcttcgtgaaccgcgacgcgctcgagggcaag
ccggtgccgcgttcgtgggccgacctgctcaagccggagtatcgcggcatggtgggttat
ctggacccgagcagcgcgttcgcgggctatgccgcggcgatcgccgccaaccaggcgctc
ggcggctcgatggacaacttcggtccggccatcggctattttcagaagctcaaggccaac
gcgccgatcgtgccgaagcagacggcctacgctcgcgtgctctcgggtgagattcctatc
ctgatcgacttcgacttcaacgcgtaccgtgcgatctacaaggaccgcgccaacgtgcag
ttcgtgattccgatggaaggcaccgtgtcgctgccgtacgtcatcgcactggtcaggggc
gcgccgcatgccgacaacggcaagaaggtgatcgactacacgctctcggacaagggccag
gcgcattgggcgcatgcgttcctgcgtccggtgcgtgccaacacgatgccggcggacgtg
gccgccaagttcctgccggccaccgactatgcccgtgtgaagccggtcgatctgcagaag
ctggccgcgcagcaggatgcgttcggtcagcagtatctgaagaacgtgcgctga
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