Pandoraea pnomenusa DSM 16536: LV28_08540 Help Entry LV28_08540        CDS       T03411                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism ppnm  Pandoraea pnomenusa DSM 16536 Pathway ppnm03018   RNA degradation Brite KEGG Orthology (KO) [BR:ppnm00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     LV28_08540  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ppnm03019]     LV28_08540 Enzymes [BR:ppnm01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      LV28_08540 Messenger RNA biogenesis [BR:ppnm03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      LV28_08540 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII AAA_22 P-loop_SecA ERCC3_RAD25_C Motif Other DBs NCBI-ProteinID:  AIU26583 UniProt:  A0A378YJG2 LinkDB All DBs Position 1273046..1274548 Genome browser AA seq 500 aa AA seqDB search MADVNAVPTPGFDSFGLHADILRAIAEQGYTQPTPIQAQAIPVVLSGRDVMGAAQTGTGK TASFSLPIIQRLLPDANTSASPARHPVRALILTPTRELADQVADNVRSYAGHTPLRNTVV FGGVDMNPQKDTLRRGVEILIATPGRLLDHVEQKTVNLSQVKMLVLDEADRMLDMGFLPD LQRILNLLPKQRQTLLFSATFSNEIKKLASSYLTNPVTIEVARRNATADKVEQTVYEVDE DDKRAAVVQILGERDLKQVIVFVNSKIGASRLARQLERDGIVTAAIHGDKSQNERMLALE AFKQGGIRALVATDVAARGLDISDLPGVINYDLPYNAEDYVHRIGRTGRAGASGEAISLC APDERKQLVEIEKLIKRELKRGQLTLERRSRSRDDRGDRYERSDRGERTERTERTERHSR HEGLRVGRSGGSGAPRRVRPEDEFFYKPYEPSPSASDAQRDSNRAAQEAGAPTAFGALPE KAPKRQVAALLAGFPRKAGN NT seq 1503 nt NT seq  +upstreamnt  +downstreamnt atggctgatgtaaatgctgttccgacccccggcttcgatagctttgggctgcatgcggac atcttgcgggccattgccgagcagggctacacccagccgacgccgatccaggcgcaggcc atcccggtggtgctgtccggtcgtgacgtcatgggtgccgcgcagacggggaccggcaag accgcgagtttctccctgccgatcatccagcggctgctccctgacgcgaacacgagtgca tcgcccgcccgccatccggtgcgcgcgctgatcctcacgccgacgcgcgaactcgccgat caggtggccgacaacgtgcgctcgtacgcggggcacacgccgctgcgcaacaccgtggtg ttcggcggcgtcgacatgaacccgcagaaggacacattgcgccgcggtgtggaaatcctg atcgccacgccgggacgcctgctcgatcacgtcgagcaaaagacggtcaacctcagccag gtcaagatgctcgtgctcgacgaagccgaccgcatgctcgacatgggcttcctgccggac ctgcaacgcattctgaacctgctgcccaagcagcgtcagacgctgctgttctcggcgacg ttctcgaacgagatcaagaagctcgcatcgagctatctcacgaatccggtcacgatcgaa gtggcgcgtcgcaacgcgacggccgacaaggtcgagcagaccgtctatgaggtcgacgaa gacgacaagcgtgccgccgtggtgcagatccttggcgagcgcgacctcaagcaggtcatc gtgttcgtcaacagcaagatcggcgcgagccgtctggcgcgtcagctcgagcgcgatggc atcgtgacggccgccattcacggcgacaagtcgcaaaacgagcgcatgctggcactcgag gccttcaagcagggcggtatccgcgcactggtcgccaccgacgtggccgcacgcggtctc gatatttccgatctgcctggggtgatcaactacgatctgccttacaacgccgaggactac gtgcaccggattggccgcacgggccgtgcgggggcgtcgggcgaagcgatttcgctgtgc gcgccggacgagcgcaagcagctcgtggaaatcgaaaagctgatcaagcgcgagctcaag cgcggccaactgacactggagcgccgcagccgttcgcgcgacgaccgaggcgatcgctac gagcgcagcgaccggggcgagcgcactgagcgcactgagcgcaccgagcgccacagccgt catgaaggcttgcgtgttggccgcagtggtggcagcggcgcgccgcgtcgtgtgcgcccg gaggacgaattcttctacaagccgtacgagccgtcgccgagcgcatcggacgcgcaacgc gacagcaaccgtgccgcacaagaggccggcgctccgacggcattcggcgcgctgccggaa aaggcaccgaagcggcaggtcgccgccctgctcgcggggttcccccgcaaggcaggcaac tga

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