Pandoraea pnomenusa DSM 16536: LV28_08585
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Entry
LV28_08585 CDS
T03411
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00730
Thiamine metabolism
ppnm01100
Metabolic pathways
ppnm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LV28_08585
Enzymes [BR:
ppnm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LV28_08585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AIU26590
UniProt:
A0A378YIK5
LinkDB
All DBs
Position
complement(1263264..1265180)
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AA seq
638 aa
AA seq
DB search
MNANPKFLSANARVDEAAIAPLPNSRKIYVQGSRPDIQVPMREISQADTPTSFGGEKNPP
IYVYDTSGPYTDPNAKIDIRSGLPALRAAWIEARGDTEALPGLTSAYGRERAADAATAEL
RFPGLHRTPRRAKAGKNVTQMHYARQGIITPEMEYIAIRENLRRQEYIESVRQTGPQGER
LAKLLSRQHPGQHFGASIPAEITPEFVRSEIARGRAIIPNNINHPESEPMIIGRNFLVKI
NANIGNSAVTSSIGEEVDKMTWAIRWGGDTVMDLSTGKHIHETREWILRNSPVPIGTVPI
YQALEKVNGKAEELTWEMFRDTLIEQAEQGVDYFTIHAGVRLAYVPMTANRMTGIVSRGG
SIMAKWCLAHHKESFLYTHFEEICEIMKAYDVAFSLGDGLRPGSIYDANDEAQLSELKTL
GELTQIAWKHDVQVMIEGPGHVPMQLIKENMDLQLEYCDEAPFYTLGPLTTDIAPGYDHI
TSGIGAATIGWYGTAMLCYVTPKEHLGLPNKDDVKEGIITYKLAAHAADLAKGHPGSQIR
DNALSKARFEFRWEDQFNLGLDPDKAREFHDETLPKDSAKVAHFCSMCGPHFCSMKITQD
VRDYAAKQGITDEAALKQGMEVKAVEFVKSGAEIYRRT
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaacccgaagttcctctcagccaacgcgcgcgtggacgaagccgcgatcgca
ccgctgccgaattcccgcaagatctacgtgcaaggctcgcgcccggacatccaggtgccg
atgcgtgaaatctcgcaagccgacaccccgacgagcttcggcggcgaaaagaacccgccg
atctacgtgtacgacacctcgggcccgtacaccgatccgaacgccaagatcgacatccgc
tccggcctgccggccctgcgtgccgcatggatcgaagcgcgcggcgacaccgaagcgcta
ccgggcctgacctcggcctacggccgcgagcgcgccgccgacgccgcgaccgcggagctg
cgcttcccgggcctgcatcgcacgccgcgtcgcgccaaggccggcaagaacgtgacgcag
atgcactacgcgcgtcagggcatcatcacgcccgaaatggaatacatcgcgatccgcgaa
aacctccgccgtcaggaatatatcgaaagcgtgcgccagacgggcccgcaaggcgagcgt
ctggccaagctgctctcgcgccagcatcccggccagcatttcggcgccagcatcccggcg
gagatcacgccggagttcgtgcgcagcgaaatcgcacgcgggcgcgccatcatcccgaac
aacatcaaccacccggaatcggagccgatgatcatcggccgcaacttcctcgtgaaaatc
aacgcgaacatcggcaactcggccgtgacgtcgtcgatcggcgaggaagtcgacaagatg
acgtgggcgatccgctggggcggcgacacggtgatggatctgtcgaccggcaagcacatc
cacgaaacgcgcgagtggattctgcgtaacagcccggtgcccatcggcaccgtgccgatc
tatcaggcgctcgaaaaggtcaacggcaaggccgaggaactgacgtgggaaatgttccgc
gacacgctcatcgagcaggccgagcaaggcgtcgactacttcacgatccacgccggcgtg
cgtctcgcctacgtgccgatgacggccaaccgcatgaccggcatcgtcagccgcggcggc
tcgatcatggccaagtggtgtctcgcgcatcacaaggaaagcttcctgtacacgcacttc
gaagaaatctgcgaaattatgaaggcgtacgacgtcgccttctcgctgggtgacggcctg
cgccccggctcgatctacgacgccaacgacgaagcgcagctctccgaactcaagacgctg
ggcgaactcacccagatcgcgtggaagcacgacgtccaggtgatgatcgaaggcccgggc
cacgtgccgatgcaactcatcaaggagaacatggatctccagctcgagtactgcgacgaa
gcgccgttctatacgctcggaccgctcacgacggacatcgcgccgggctacgaccacatc
acgtcgggcatcggtgcggcgaccatcggctggtacggcacggccatgctgtgctacgtc
acgccgaaggaacacctgggtctgccgaacaaggacgacgtcaaggaaggcatcatcacg
tacaagctcgccgcgcacgccgccgatctcgccaagggccaccccggttcgcagattcgc
gacaacgcgctgtcgaaggcgcgtttcgaattccgttgggaagaccagttcaacctgggt
ctcgatccggacaaggcgcgcgaattccacgacgaaacgctgccgaaggattcggccaag
gtcgcgcacttctgctcgatgtgcggtccgcacttctgctcgatgaagatcacgcaggac
gtgcgcgattacgcggccaagcaaggcatcacggacgaagccgccctcaagcagggcatg
gaagtcaaggccgtcgagttcgtcaagagcggcgccgagatctatcgtcgtacctga
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