Pandoraea pnomenusa DSM 16536: LV28_08985
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Entry
LV28_08985 CDS
T03411
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppnm03009
]
LV28_08985
Enzymes [BR:
ppnm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
LV28_08985
Ribosome biogenesis [BR:
ppnm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LV28_08985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AIU26660
LinkDB
All DBs
Position
complement(1167503..1168093)
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AA seq
196 aa
AA seq
DB search
MTLLALNKPFGTICQFSPHPTRPTLAECIAQPGVYPAGRLDADSEGLLLLTDDGRLQARI
AEPERKLPKTYWAQVEGAYEETAVARLRAGLDLGDFVTLPCDAREIPEPQALWPRHPPIR
YRASIPTHWLEITLVEGKNRQVRRMTAAVGKPTLRLVRVAIGPVDVFALNLAPGQWCELP
QQILTLSGQRRDRSSR
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgacacttctcgcactcaacaaacccttcggcacgatctgtcagttctcgccgcatccc
acccgcccgacactcgccgaatgcatcgcgcagcccggggtgtatccggcgggtcgcctc
gatgccgacagcgaaggactgctgctgctcaccgacgatggtcgccttcaggcgcggatc
gccgaaccggaacgtaagttgcccaagacctattgggcgcaggtcgaaggggcttacgaa
gaaacggctgtcgctcgcctgcgcgccggtctcgatctgggcgatttcgtcaccctgccc
tgcgacgcccgcgagattcccgagccgcaggcgctgtggcctcgccatccgcccatccgc
tatcgcgcgagcattccgacccactggctggagatcacgctggtcgaaggcaagaaccgt
caggtcagacgcatgacggccgccgtgggcaaaccgaccctgcgacttgtgcgcgtggcc
atcggtccggtcgacgtcttcgcgctgaatctggcgccaggacaatggtgcgaactgccg
caacaaatacttacactttccggtcaacgccgcgatcgctcatctcgttga
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