Pandoraea pnomenusa DSM 16536: LV28_09670
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Entry
LV28_09670 CDS
T03411
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_09670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_09670
Transporters [BR:
ppnm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LV28_09670
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
PIN_9
Motif
Other DBs
NCBI-ProteinID:
AIU26775
UniProt:
A0A378YJJ0
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All DBs
Position
1034211..1035386
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AA seq
391 aa
AA seq
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MAFSRRGFWQRTLGALACAAALGSMAGTATAAPVALNIVDVAGNLALTQKGFEAFRDKYP
DLVSRMTFTNAPAPQLPGKIKAMQAAGRADIDIVLTGTDALAAGIQQNLWQRLLPDYSAK
LPGVLDKYPPNVRAMQDLSKGYGLTVTFMPAGPLVEYNPAKVTQPPKTPAELLAWCKANP
GKLIYARPANSGPGRTFLMGLPYLLGDKDPHDPIKGWDKTWAFLKELDSCIPYYPGGTSA
VMKELGEGSRDMTLTVTGWDINPRALGIVPASFRVQAFDKLTWVNDAHYMVVPKGVSKEK
MEVILKLINFMLEPAQQALTYDDGYFYPGPAVKDVPLSAAPAKSQEVIAKYGRPEYAKLI
ADYPHAVPLDATAMVAAFQKWDAEIGALKSK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggccttcagtcgcaggggattctggcaacgcacgcttggcgcactggcatgtgccgcc
gcattggggagcatggcgggtaccgcgaccgccgcgccggtcgcgctgaacatcgtggat
gtggcgggcaacctcgcgctcacgcaaaagggcttcgaggcgttccgcgacaagtatccg
gatctcgtttccaggatgacgtttaccaatgcgcccgcgccgcagttgccgggcaagatc
aaggccatgcaggcggccggtcgcgccgatatcgacatcgtgctcacgggcaccgatgcg
ctggccgcggggatacagcagaacctctggcagcgcctgctgcccgactacagcgcgaag
ctgccgggcgtgctcgacaagtacccgcccaatgtgcgcgcgatgcaggatctctcgaag
gggtacggactgacggtgactttcatgcccgccggtccgctcgtggagtacaacccggcg
aaggtgacgcagccgccgaagacgcccgccgaactgctggcctggtgcaaggcgaacccg
ggcaagctgatatacgcgcgcccggccaattcgggcccggggcgcacgttcctgatgggg
ctgccgtatctgctcggtgacaaggacccgcacgatccgatcaagggctgggacaagacc
tgggcgttcctgaaggagctcgattcgtgcattccgtactatccgggcggcacctcggcg
gtgatgaaggaactgggcgagggcagccgcgacatgacgctgaccgtcacgggctgggac
atcaatccgcgcgcgctgggtatcgtgccggcgagcttccgggtgcaggcattcgacaag
ctcacgtgggtcaacgacgcgcactacatggtggttccgaagggcgtgtcgaaagagaag
atggaggtcattctcaagctcatcaacttcatgctcgaaccggcccagcaggcgctgacg
tatgacgatggctacttctatccgggtcctgcggtgaaggacgtgccgctctcggccgcc
ccggcgaagagccaggaagtgatcgcgaagtacggccgtccggagtacgcgaagctcatt
gccgactacccgcacgccgtgccgctcgacgcgacggcgatggtcgcggcgttccagaag
tgggatgccgagatcggtgcactgaaatcgaagtga
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