Pandoraea pnomenusa DSM 16536: LV28_09900
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Entry
LV28_09900 CDS
T03411
Name
(GenBank) SAM-dependent methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppnm03009
]
LV28_09900
Enzymes [BR:
ppnm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
LV28_09900
Ribosome biogenesis [BR:
ppnm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LV28_09900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
Motif
Other DBs
NCBI-ProteinID:
AIU26814
UniProt:
A0A378YJT3
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All DBs
Position
complement(992892..993608)
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AA seq
238 aa
AA seq
DB search
MSGTLYLIPNTLGTNTRGGLPAVLPEEVRAVTAHLKYFVGEQAKSTRAFLKLVGVSTPIQ
EIDIRELNVNTPAAAVDALLAPILAGADGGLVSEAGCPAVADPGALLVRRAHEKGVRVVP
FVGPSSILLALMASGLNGQSFAFHGYLPTDAGERARRLRELEQRSRKEKQTQIFIETPYR
NKAMLDALLQHCDATTLLCVAVDVTQEAEQIVTHQVKGWPHASVELHKRPAIFLFLSQ
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcacgctgtatctgattcccaacacactcgggaccaacacgcgcggtggcctg
ccggcggtactcccggaagaagtgcgagcggtcacggcacatctgaagtacttcgtcggc
gaacaggccaagagcacgcgcgcattcctgaagctggtgggggtgagcacaccgatccag
gaaatcgatatccgcgaactgaatgtcaacacgccggccgctgccgtcgatgcccttctc
gcccccattctcgccggcgcggacggcggcctcgtatccgaagccggatgcccggccgtc
gccgacccgggcgcattgctggttcgacgcgcccatgaaaaaggcgtgcgcgtcgtgccg
ttcgtcggcccgagctcgattcttctggcgctgatggccagcggcctgaacggccagagt
ttcgccttccacggttacctgccgaccgacgccggcgagcgcgccaggcggctgcgcgaa
ctcgagcaacgttcgcgcaaggaaaagcaaacgcagatcttcattgagacaccctaccgc
aacaaggccatgctcgacgccctgctgcagcattgcgacgcgaccaccctgctctgcgtt
gcggtcgatgtcacgcaagaggccgagcagatcgtgacgcaccaggtcaagggctggcct
cacgcgagcgtcgagctccacaaacgtcccgcgattttcctgttcctcagccagtaa
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