Pandoraea pnomenusa DSM 16536: LV28_10785
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Entry
LV28_10785 CDS
T03411
Name
(GenBank) mechanosensitive ion channel protein MscS
KO
K16053
miniconductance mechanosensitive channel
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_10785
Transporters [BR:
ppnm02000
]
Other transporters
Pores ion channels [TC:
1
]
LV28_10785
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Phage_holin_3_2
Motif
Other DBs
NCBI-ProteinID:
AIU26951
UniProt:
A0A378YMU3
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Position
796672..797910
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AA seq
412 aa
AA seq
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MTWEGMLAWLDNVPWARLAVALTILLVVALLVQALAQYLIVRVVRLVVQRTANRWDDALL
AHRVFQRAAHILPYLVIQFGIAWVPDLPPKAVLLISNIALATTLLYATLTIAGALDAAQT
VYALSEHARTRSIKGYVQLGKIALYVVAAIAIVATVIDRSPWLLLSGLGAMSAVLLLVFK
DTIMSFVASVQLTSNDMLRVGDWIEMPQVGADGDVVDIALHTVKVQNWDKTITTIPTWRL
ISESFRNWRGMQQAGGRRIKRTLCIDAGSVGFLDDAEIARLSRLHLLEPYLIEKRRSIAD
ANAALGVAAGVPANTRRLTNIGTFRAYALAYLKAHPNIHEGMTCMVRSLEPSSTGIPVEL
YCFTNTTVWAEYERVQGDVFDHLLAILPEFGLRMYQNPAGADFARWQAQRAA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacgtgggaaggaatgttggcgtggctcgacaacgtaccgtgggcacggctggcggtg
gcgttgacgatactgttggtggtggcgttgctcgtgcaggccctggcgcagtacctgatc
gtgcgcgtcgtgcgcctcgtggtgcagcgcacggccaatcgctgggacgatgcgctgctc
gctcaccgcgtgttccagcgggcggcgcacatcctcccgtacctcgtgatccagttcggg
attgcgtgggtcccggatctgccgcccaaggctgttctgctgatcagcaacattgcgctg
gccaccacgctcctttacgcgacattgaccattgccggagccctcgatgccgcgcaaacg
gtctatgccctgtcggaacatgcgcgcacacgctcgatcaaggggtacgtgcagctaggc
aagatcgcgctgtacgtggtggcggcgatcgccatcgtggccacggtcatcgaccgctcg
ccgtggctgctgctctccggcctgggcgcgatgtcggcggtgctgctgctggtgttcaag
gacacgatcatgtcattcgtggctagcgtgcagctgacgtcgaacgacatgctgcgcgtc
ggtgactggatcgagatgccgcaggtcggcgcggacggcgacgtggtcgacatcgcgttg
catacggtgaaggtgcagaactgggacaagacgatcaccacgattccgacgtggcgtctg
atttccgagagcttccggaactggcgcggaatgcaacaggcgggcggccgtcgcatcaag
cggacgctgtgcatcgacgccggcagcgtcggattcctcgacgacgcggagatcgcgcga
ctgtcccggctgcatctgctcgagccgtacctgatcgaaaagcgtcgctcgattgccgac
gcgaacgctgcgctgggcgtggctgccggcgtaccggcgaatacccgtcgcttgacgaac
atcggcacgttccgcgcttatgcgctggcgtatctgaaggcgcacccgaacatccacgag
ggcatgacctgcatggtgcgctcgctggaaccgtcgtcgacgggtatccccgtcgaactg
tattgcttcacgaacacgactgtctgggcggagtacgaacgcgtgcagggcgatgtgttc
gatcacctgctcgcgatcctgcccgagttcggcctgcgcatgtaccagaacccggccggt
gccgatttcgcgcgctggcaggcgcagcgcgcggcgtga
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