KEGG   Pandoraea pnomenusa DSM 16536: LV28_11995
Entry
LV28_11995        CDS       T03411                                 
Name
(GenBank) AMP-dependent synthetase
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Pathway
ppnm00061  Fatty acid biosynthesis
ppnm00071  Fatty acid degradation
ppnm01100  Metabolic pathways
ppnm01212  Fatty acid metabolism
ppnm02024  Quorum sensing
ppnm04146  Peroxisome
Module
ppnm_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    LV28_11995
   00071 Fatty acid degradation
    LV28_11995
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    LV28_11995
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LV28_11995
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:ppnm01004]
    LV28_11995
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppnm04147]
    LV28_11995
Enzymes [BR:ppnm01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     LV28_11995
Lipid biosynthesis proteins [BR:ppnm01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   LV28_11995
Exosome [BR:ppnm04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   LV28_11995
  Exosomal proteins of breast cancer cells
   LV28_11995
SSDB
Motif
Pfam: AMP-binding AMP-binding_C DUF7382 Cyclase_polyket
Other DBs
NCBI-ProteinID: AIU27155
UniProt: A0A378YLX7
LinkDB
Position
complement(526343..527887)
AA seq 514 aa
MNIANTLARAAQRYPDHIATYLGDTPLHDYATLARRCARLAAGLRSMGLADGARVALWMR
NRPEYLEWLYAIWWAGLVAVPINAKLHPREAAFIVGDAAADILLAQADDLQSIAEFVSPS
VVRMPPEDSRVAEWLQVEASQGSGHSAGSLRPGAVASRENDDLAWIFYTSGTTGRPKGVM
LSHRNLWSMAACYLTDVDTPGREDRTLYAAPMSHGAGLYSVIFMMQAAGHVFPASGGFDA
QEMFALAASLGNISCFAAPTMVNRLVRHAQATEAKSDGFRTLVYGGGPMYAADIERALSV
MGPRFVQIYGQGESPMTITVLPREAIAASEHPRWAPRLASVGHAHAMVEVAVVDDDGEPV
AAGTPGEVVVRGDVVMQGYWRNPEATAKTLRDGWLWTGDIGVLDDDGYLTLKDRSKDVII
SGGTNIYPREVEEVLLRADGVAEVAVIGEPDAEWGEVVVAYVVCTPGDTLDSAALDAFCL
AHIARFKRPKRYVALDALPKNHYGKVLKTALRSA
NT seq 1545 nt   +upstreamnt  +downstreamnt
atgaacattgccaataccctcgcccgcgccgcgcagcggtatccggatcacatcgcgacg
tatcttggcgacacgccgctgcacgattacgcaacgctcgcccggcgctgcgcacgcctg
gctgccggcctgcgctcgatggggctggccgacggcgctcgagtggcgctgtggatgcgc
aaccggcccgagtacctcgagtggttgtatgcgatctggtgggccgggctcgtcgccgtg
ccgatcaacgcgaagctgcatccgcgcgaggcggccttcatcgtcggcgacgccgcggcg
gacattctgctggcgcaggcggacgatctccagtccatcgccgaattcgtgtcgccgtcg
gtcgtgcgcatgccgccggaggacagccgcgtcgccgagtggctccaggtcgaagcgagt
caaggaagcgggcactcagcgggcagcctccggcctggcgccgtcgcgtcgcgcgaaaac
gacgatctggcgtggatcttctacacgtctggaacgaccgggcgcccgaagggtgtgatg
ctgtcccatcgaaacctgtggtcgatggccgcgtgctacctgacggacgtcgacacaccc
ggtcgcgaggaccgcaccctgtacgcggccccgatgtcacatggggcgggactctacagc
gtgatcttcatgatgcaggcggcgggccacgtgtttcccgcgtccggtgggttcgatgcg
caggagatgttcgccctggcggcgtcactggggaacatttcgtgtttcgcggcgcccacc
atggtgaaccgtctggtgcggcatgcgcaggccacggaggcaaagtcggacgggttcagg
acgctcgtctacggcggcgggccaatgtacgcggcggacatcgagcgcgcgctttcggtg
atgggaccgcgcttcgtgcagatatacggccagggcgagtcaccgatgacgatcacggtg
ctcccgcgcgaggctatcgcggcgagcgaacatccgcgctgggcgccgcgtctggcgtcg
gtcggccacgcgcatgccatggtggaagtggccgtggtcgacgacgacggcgagccggtc
gcggcgggcacgcccggcgaggtcgtggtgcgcggcgacgtcgtgatgcagggctactgg
cgcaatccggaggcgacggcgaagaccttgcgcgacggctggctgtggacgggcgatatc
ggcgtgctggacgacgacggctacctcacgctcaaggaccgctcgaaggacgtgatcatc
tcgggcggcacgaacatctatccgcgcgaagtcgaggaggtactgctgcgcgccgacggc
gtcgcggaggtggccgtgatcggcgagccggacgccgagtggggcgaagtcgtggtcgcg
tacgtggtttgcaccccgggggacacgctcgacagcgccgccctcgacgcattctgcctg
gcgcatatcgcacggttcaagcgccccaagcgatatgtggcgctcgacgcactgcctaag
aaccactatggcaaggtgctgaaaacggcgttgcgttcggcctag

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