Pandoraea pnomenusa DSM 16536: LV28_13610
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Entry
LV28_13610 CDS
T03411
Name
(GenBank) 16S rRNA methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppnm03009
]
LV28_13610
Enzymes [BR:
ppnm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
LV28_13610
Ribosome biogenesis [BR:
ppnm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LV28_13610
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Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF7439
Motif
Other DBs
NCBI-ProteinID:
AIU27428
UniProt:
A0A378YPN0
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All DBs
Position
complement(200288..201172)
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AA seq
294 aa
AA seq
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MDERLMALAEGQHYPTGTLYVVATPLGNLADITVRALHILGMVDAIACEDTRNSAQLLQR
YGIDKPLIAAHQHNENEAATRLVARLREGERIAYISDAGTPGVSDPGARLVDAVRAAGLG
VVPVPGASAVITLLSAAGAWVDTFTFVGFLPSKAQQRAQAISALAGSTSAHVFYEAPHRI
VETVAALADGLPGERRLLIGRELTKRFEDIHECALADGVAWLKADANRQRGEFVLAVSGA
AASAGGDGVDAEAERVLALLVAELPTKSAARLAAAITGAPKNALYERALALKHD
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacgcctgatggcgctggccgaaggccagcattacccgacaggcacgctgtac
gtggtggccacgccgctgggcaacctggccgacatcaccgtgcgcgcgcttcacatcctc
ggcatggtcgatgccattgcctgcgaagatacgcgcaacagcgcgcagttgctccagcgt
tacggcatcgacaagccgttgattgcggcccatcagcacaacgagaacgaagcggcgacg
cgtctggtggcgcgcttgcgcgaaggcgagcgcattgcctacatctccgatgccggcacg
cccggcgtctccgatccgggcgcgcgactggtcgatgcggtgcgggcggcgggtctgggt
gtggtgccggtgccgggcgcgagcgcggtcatcacgctgctctcggccgcgggcgcgtgg
gtcgatacattcacgttcgtgggctttctgccgtcaaaggcacagcagcgcgcgcaggcc
atctcggcgctcgcgggctcgacttcggcccatgtgttctacgaagcgccacatcgcatc
gtggagacggtcgccgcgttggcggacggactgccgggcgagcgtcgcctgctgatcggc
cgcgagctcaccaagcgcttcgaagacattcacgagtgcgcactggcggacggcgtggcg
tggctgaaggccgacgcgaaccgtcagcgtggcgagttcgtactcgcggtatcgggcgcg
gccgcaagcgcgggcggcgacggcgtggacgctgaagccgaacgtgtgctcgccctgctc
gttgccgagctgccgacgaagagcgccgccagacttgccgcggcgatcaccggcgcgccg
aagaacgccctctacgaacgcgccctcgcgctgaagcacgactga
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