Pandoraea pnomenusa DSM 16536: LV28_13690
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Entry
LV28_13690 CDS
T03411
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LV28_13690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppnm03400
]
LV28_13690
Enzymes [BR:
ppnm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LV28_13690
DNA repair and recombination proteins [BR:
ppnm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LV28_13690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
HypA
zf-CHY
ADDB_N
AAA_16
AAA_22
DUF5817
Motif
Other DBs
NCBI-ProteinID:
AIU27441
LinkDB
All DBs
Position
complement(183604..185964)
Genome browser
AA seq
786 aa
AA seq
DB search
MPTIARVALDTPLPTLFDYRLDQAATLGQLVQVPFGRRQVVGVVWELTQRSDVPSAKLRD
VTSVWHELPALGDDWRDLMQFAARYYQRGIGEVALPAVPGHLRTPMRWSRLLARRGVQRY
RLADGALPALMENVPARLRAQRRLAEGLAQAGTLDADEARALCAKAADVLKQWAAAGWVV
VETVPFHETVREADECSDVMDGMDELRVSGATEHPVADAAPGAAPGRTLTAGQADAVAAI
HGALVATQAKPDTTPADDAPACTPFLLYGVTGSGKTEVYLRAVAEALREPEAQVLVLVPE
INLTPQLEGVFRTRFPNETLVTLHSGLAEGERARHWLAAHRGEARVVLGTRLAIMASLPH
LRLIVIDEEHDPSYKQQEGLRYSARDLAIWRANRLRIPVVLGSATPSLDSWRRADQGRYV
RLAMPERATPDAVLPRVSLIDMEVERKRQRAVHEGLSQPLLAALRARLDAGEQSLLFLNR
RGYAPVLNCDACGWISDCRRCSAHMVLHKPEHRLRCHHCGAEARIPHACPDCGNLDLAPL
GRGTQRIEEALTAHFPDARLARIDADSTRRKGSAQALFAQVHAGEVDILIGTQMVAKGHD
FRNVTLVGVVNADSALFSHDFRAAERLFAQLMQVAGRAGRAARADGPGDVLIQTRYASHP
LFAALMRHDYPGFAAQQLEERRVALLPPFTHQALLRAEARKLDDAMAFLRQAREIAATPA
LNDPRISLWDPVPMTMVRIAGTERAQLVVESPHRGALQRFLTRWMSELRTLRAPVRWHLE
VDPLEI
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
gtgcccactatcgcccgcgtggccctcgatacgccacttcccaccttgttcgactatcgt
ctcgatcaggccgcgaccctcggtcaactggtccaggttccgttcggacgacgacaggtg
gtgggtgtcgtctgggaattgacgcagcgcagcgacgttccgtccgcgaagctgcgcgac
gtgacatcggtatggcacgaattgccggcgctcggcgacgactggcgcgacctgatgcag
tttgccgcgcgttattaccagcgcggcattggggaagtggcgctgcccgccgtgcccgga
catcttcgtacgccgatgcgatggtcgcgcctgctcgcccggcggggcgtgcagcgctat
cgcttggccgacggtgcgctgccggcgctcatggaaaacgtgcccgcccggctgcgcgcg
cagcgccgcctggccgaaggactggcgcaagccggcacgctggacgccgacgaggcgcgc
gccctctgcgcgaaagcggccgacgtgctcaagcagtgggccgccgccggctgggtcgtg
gtggaaacggtgccgtttcacgaaacggtgcgcgaagcggacgaatgcagcgacgtcatg
gacgggatggacgagttgcgcgtctcgggcgccacggaacaccccgtggccgatgctgca
cctggtgccgcccccggccgcaccctgacggccggccaggccgacgccgtggccgccatt
cacggggcgctcgtcgccacgcaggcgaagccggacacgacgcccgccgacgacgcgcct
gcgtgcacgccgttcctcctttacggggtgaccggcagcggcaagaccgaggtgtacctg
cgcgccgtcgccgaagcgctgcgcgagcccgaggcccaggtgctcgtgctcgtacccgag
atcaacctgacgccgcagctcgaaggcgtctttcgcacgcggttcccgaacgagacgctc
gtcaccctgcacagcgggctggccgaaggcgagcgcgcccggcattggcttgcggcgcac
cgcggcgaagcgcgcgtggtgctcggcacacggctggcgattatggcgtcactgccgcat
ctgcgcctgatcgtgatcgacgaagagcacgatccgtcgtacaagcagcaggagggcctg
cgctattcggcgcgagacctcgccatctggcgggcaaaccggttgcgcattccggtggtg
ctcggctcggccacgccgtcgctcgacagctggcgacgcgccgatcagggccggtacgtg
cgactcgccatgcccgagcgcgccaccccggacgccgtgctgccgcgcgtgtcgctcatc
gacatggaagtcgagcgcaagcgccagcgcgccgttcacgaagggttgtcgcaaccgctg
ctcgccgccctccgggcgcgtctcgacgcgggcgagcaaagcctgctgttcctgaatcga
cgcgggtacgcgcccgtgctcaattgcgatgcctgcggctggatcagcgactgccgccgt
tgcagcgcgcacatggtgctgcacaagccggaacaccgcctgcgttgtcatcattgcggc
gccgaagcgcgcatcccgcacgcctgccccgactgcggcaacctcgatctcgcgccgctc
ggtcgcggcacccaacgcatcgaggaagcgctgacggcccatttccccgacgcgcggctc
gcccgcatcgacgccgacagcacgcgccgcaagggcagcgctcaggcgctcttcgcgcag
gtccacgccggcgaggtcgacatcctcatcggcacgcaaatggtcgccaagggacacgac
ttccgcaatgtcacgctcgtgggcgtggtcaacgccgacagcgcactgttctcgcacgac
tttcgggccgccgaacgactcttcgcacaactcatgcaggtggccggtcgcgccggccgg
gccgcccgggccgacggccccggcgacgtgctgatccagacgcgctacgcgtcgcacccg
ttgttcgcggcgctcatgcgtcacgactaccccggctttgccgcgcagcagctcgaggag
cgacgcgtcgcactgctgccgccgttcacgcaccaggccctgctgcgcgccgaggcccgc
aagctcgacgacgccatggctttccttcggcaagctcgtgagatcgccgccaccccggcg
ctgaacgacccgcgcatctccctgtgggatccggtgccgatgacgatggtccggatcgcg
ggcacggagcgtgcgcaactcgttgtggagagcccgcaccggggcgcgctccagcgcttt
ctcacgcgatggatgagcgaactgcgcaccctccgggccccggtgcgatggcacctcgaa
gtggatcctctcgaaatataa
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