Pandoraea pnomenusa DSM 16536: LV28_15340
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Entry
LV28_15340 CDS
T03411
Symbol
gatB
Name
(GenBank) glutamyl-tRNA amidotransferase
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00970
Aminoacyl-tRNA biosynthesis
ppnm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LV28_15340 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ppnm03029
]
LV28_15340 (gatB)
Enzymes [BR:
ppnm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
LV28_15340 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
LV28_15340 (gatB)
Mitochondrial biogenesis [BR:
ppnm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LV28_15340 (gatB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AIU27729
LinkDB
All DBs
Position
complement(5193541..5195022)
Genome browser
AA seq
493 aa
AA seq
DB search
MNLMQWEVVIGLETHAQLSTASKIFSGASTQFGAAPNTQACPVDLALPGVLPVLNRGAVE
RAIEFGLAIGATIAPRSIFARKNYFYPDLPKGYQISQYEIPVVQGGSLKIQVDADPRTGR
EAYEKVVTLTRAHLEEDAGKSLHEDFAGMTGIDLNRAGTPLLEIVTEPDMRSAAEAVAYA
KALHGLVVWLGICDGNMQEGSFRCDANVSVRPVGQKAFGTRAEIKNLNSFRFLEEAIQYE
VRRQIELIEDGGEVVQETRLYDPDKKETRSMRSKEDAHDYRYFPDPDLMPLVIDSEWIDR
VRAALPELPAGMQARFVETYGLSDYDAAVLTQSKAQAAYFEAVVAKAGKASAKPAANWIM
GELSSLLNREDLTIEASPVSSAQLAGLLARIADNTISNKIAKEVFQLMWEERATDDAAAD
RIIEAKGLKQITDTGAIEKIIDEVLAANAKSVEEFRAGKEKAFNALVGQAMKATKGKANP
AQVNELLKKKLGA
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccttatgcaatgggaagtcgttattggtctggagacgcacgcacagctctccacc
gcttccaagattttctcgggcgcgtcgacgcagttcggcgccgcccccaacacgcaggcc
tgcccggtggatctggcgctgccgggcgtgctgcccgtgctcaatcgcggcgcggtggag
cgcgcgatcgagttcggtctggccattggcgccacgatcgcgccgcgcagcattttcgcg
cgcaagaattacttctatcccgatctgcccaagggctatcagatcagccagtacgagatc
ccggtggtgcagggcggctcgctgaagattcaggtcgacgccgacccgcgcaccggccgc
gaggcttatgaaaaggtcgtcacgctcacgcgcgcgcacctggaggaagacgcgggcaag
tcgctgcacgaggacttcgcgggcatgacgggcatcgatctgaaccgcgccggcacgccg
ctgctggagatcgtgaccgaacccgacatgcgcagcgcggccgaggccgtggcttacgcc
aaggcgctgcacggcctggtcgtgtggctcgggatctgcgacggcaacatgcaggaaggg
tcgttccgttgcgacgcgaacgtgtccgtgcggcccgtcggccagaaggcgttcggcacg
cgcgccgagatcaagaacctgaactcgttccgctttctcgaagaagcgattcagtacgaa
gtgcgccgtcagatcgaactgatcgaggatggtggcgaagtggtgcaggaaacgcgtctg
tacgatccggacaagaaggaaacgcgttcgatgcgcagcaaggaagacgcgcacgactac
cgctacttcccggacccggacctgatgccgctcgtgatcgacagcgaatggatcgatcgc
gtgcgcgccgcgctgcccgagctgcctgcgggcatgcaggcgcgctttgtcgaaacgtat
ggcctgtccgactacgacgccgcggtgctcacgcagtcgaaggcgcaggccgcctacttc
gaagccgtggtcgccaaggccggcaaggcgagcgccaagccggccgcgaactggatcatg
ggcgagctgtcgtcgctgctcaatcgcgaagacctgaccatcgaggccagcccggtctcg
agcgcccaactggccggattgctcgcacgcatcgccgacaacacgatctcgaacaagatc
gccaaggaagtcttccaactgatgtgggaggagcgtgccaccgacgacgccgccgccgat
cgcatcatcgaggcgaaggggctgaagcaaatcacggacaccggtgcgatcgagaagatc
atcgacgaagtgctggcggccaacgccaagtccgtcgaggaattccgcgcgggcaaggag
aaggcgttcaacgcgctggtcggtcaggcgatgaaggccaccaagggcaaggcgaacccg
gcgcaggtcaacgaactgctcaagaagaagctcggcgcctga
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