KEGG   Pandoraea pnomenusa DSM 16536: LV28_15855
Entry
LV28_15855        CDS       T03411                                 
Name
(GenBank) lytic transglycosylase
  KO
K08309  peptidoglycan lytic transglycosylase [EC:4.2.2.29]
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ppnm01011]
    LV28_15855
Enzymes [BR:ppnm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.29  peptidoglycan lytic transglycosylase
     LV28_15855
Peptidoglycan biosynthesis and degradation proteins [BR:ppnm01011]
 Peptidoglycan biosynthesis and degradation
  Lytic transglycosylase
   LV28_15855
SSDB
Motif
Pfam: SLT SLT_L
Other DBs
NCBI-ProteinID: AIU27825
UniProt: A0A378YRZ5
LinkDB
Position
complement(5085017..5087023)
AA seq 668 aa
MSERLTRVYRAAALVLTAAALVACSTTEATGRPKAHAAAGRSAPSADTLSQRSPDDIFVQ
LREAARSNDAPRATALAAMLTDYDVPSYVQYFQIKPRMFDRSGKALIDAPDDEVRAFLRT
YDGQAIADRMRNDWLLVLGKRHDWQTFDAEYPKFVLDDDTQVKCYALMSRASRGENVTQA
AMDLLTTPKHYGEGCVDMINTLAASGQLPRKEVWHQIRLAYEENYTSLGKQIADALGATR
PDDTLLDMAATRPAQILARGIDGTETSRQLALLATVRMARSDAMLAASSFSGIAGNLSAD
ERAIGWGAIGMRGALSQNPMAINWYRQAGSAKLSNTAQEWKIRAALRAGDWNLVRSGIEA
MPASLRDDGVWTYWYGRALREAGQGDAARAQFQKIAMQPNFYGQLANEELGNKTALPPRT
SVTRAEIDANRSNPGFIRAAKFYDLGLRFEGNREWNWELRNMTDRQLLAAAQYANNIELF
DRAVNTADRTKVEHDFTLRYLMPFRAKVEPLAAAVDLDEAWAYGLIRQESRFIINARSSA
GAGGLMQIMPATAKMVARQIGMDYTPGMMHDIDTNIRLGTSYLSDIYNKFDGSAVLASAG
YNAGPGRPRTWRSTLDRPVEGAIFAETIPFNETRTYVENVLSNTTYYSALITGRPQSLKE
RLGVILPQ
NT seq 2007 nt   +upstreamnt  +downstreamnt
atgtccgaacgtttgacccgagtatatcgcgccgccgcgcttgtcctgaccgcagccgcg
ctcgtcgcctgcagcacgaccgaggcgactggacgtcccaaggcgcatgcggcagccggc
cgctcggcgccctcggccgataccctgtcccagcggtcgccggacgacatcttcgtgcaa
ctgcgtgaggccgcccgcagcaacgacgcgccgcgcgccaccgcgcttgccgccatgctc
accgactacgacgtgccgtcgtacgtccagtacttccagatcaagccgcgcatgttcgac
cggtcgggcaaggcgctcatcgatgcgccggacgacgaagtccgggccttcctgcgcacg
tacgacggtcaggccatcgccgatcgcatgcgcaacgactggctgctggtgctcggcaag
cgtcacgactggcagacgttcgacgccgagtatccaaaattcgtgctcgacgacgacacg
caggtcaagtgctacgcgctcatgtcgcgggcgtcgcgaggcgagaatgtcacgcaggcc
gccatggatctgctgaccacgccgaagcactacggcgagggttgcgtcgacatgatcaac
acgctcgccgcgagcggtcagttgccgcgcaaggaagtctggcatcagatccgtctggcg
tacgaggaaaactatacgtcgctgggcaagcagatcgccgacgcccttggcgccacacgc
ccggacgacacgctgctcgacatggcggccacgcgcccggcgcagatcctcgcgcgcggc
atcgacggcacggaaacctcgcgacagctggcgctgctcgccacggtgcgcatggcgcgc
tccgatgccatgctcgccgccagcagcttctccggcatcgccggcaacctgtcggccgac
gagcgtgccatcgggtggggggcgatcggcatgcgcggggcgctgtcgcagaatccgatg
gcgatcaactggtaccgccaggccggatcggccaagctctccaataccgcgcaggaatgg
aagatccgcgccgcgctgcgcgccggcgactggaacctcgttcgctcgggcatcgaggcc
atgcccgcatcgctgcgcgacgacggcgtgtggacctactggtacggccgagcgctgcgc
gaagccggccagggcgacgccgcacgtgcgcaattccagaagatcgccatgcaaccgaat
ttctacggtcaactggcgaacgaggaactgggcaacaagaccgcgttgccgccgcgcact
tccgtcaccagggcggaaatcgacgccaaccgctcgaaccccggcttcatccgcgccgcc
aagttctacgacctcggcctgcgcttcgaaggcaatcgcgagtggaactgggagttgcgc
aacatgaccgaccgtcagttgcttgccgccgcgcagtacgccaacaacatcgagttgttc
gaccgcgccgtcaacacggccgatcgcacgaaggtggagcacgatttcacgttgcgctac
ctgatgccgttccgtgccaaggtcgagccgctggccgctgccgtcgatctcgatgaggcg
tgggcctacggcctgattcgccaggagtcgcgcttcatcatcaatgcacgctcgtcggcg
ggcgccggcggtctgatgcagatcatgcccgcgaccgcgaagatggtggcccgccagatc
ggcatggattacacgccgggcatgatgcacgacatcgacaccaatatccggctgggcacg
agctatctctcggatatctacaacaagttcgacggctcggccgtgctcgcatcggccggc
tacaacgccggaccgggacgcccgcgcacgtggcgttccacgctcgatcgtccggtcgag
ggcgcgatcttcgcggagacgattccgttcaacgagacgcgtacctacgtcgagaacgtg
ttgtccaacaccacgtattactcggcgctcatcacggggcgtccgcaatcgctcaaggag
cggcttggcgtcatcctgccccagtga

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