Pandoraea pnomenusa DSM 16536: LV28_15855
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Entry
LV28_15855 CDS
T03411
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppnm01011
]
LV28_15855
Enzymes [BR:
ppnm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LV28_15855
Peptidoglycan biosynthesis and degradation proteins [BR:
ppnm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LV28_15855
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
AIU27825
UniProt:
A0A378YRZ5
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All DBs
Position
complement(5085017..5087023)
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AA seq
668 aa
AA seq
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MSERLTRVYRAAALVLTAAALVACSTTEATGRPKAHAAAGRSAPSADTLSQRSPDDIFVQ
LREAARSNDAPRATALAAMLTDYDVPSYVQYFQIKPRMFDRSGKALIDAPDDEVRAFLRT
YDGQAIADRMRNDWLLVLGKRHDWQTFDAEYPKFVLDDDTQVKCYALMSRASRGENVTQA
AMDLLTTPKHYGEGCVDMINTLAASGQLPRKEVWHQIRLAYEENYTSLGKQIADALGATR
PDDTLLDMAATRPAQILARGIDGTETSRQLALLATVRMARSDAMLAASSFSGIAGNLSAD
ERAIGWGAIGMRGALSQNPMAINWYRQAGSAKLSNTAQEWKIRAALRAGDWNLVRSGIEA
MPASLRDDGVWTYWYGRALREAGQGDAARAQFQKIAMQPNFYGQLANEELGNKTALPPRT
SVTRAEIDANRSNPGFIRAAKFYDLGLRFEGNREWNWELRNMTDRQLLAAAQYANNIELF
DRAVNTADRTKVEHDFTLRYLMPFRAKVEPLAAAVDLDEAWAYGLIRQESRFIINARSSA
GAGGLMQIMPATAKMVARQIGMDYTPGMMHDIDTNIRLGTSYLSDIYNKFDGSAVLASAG
YNAGPGRPRTWRSTLDRPVEGAIFAETIPFNETRTYVENVLSNTTYYSALITGRPQSLKE
RLGVILPQ
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacgtttgacccgagtatatcgcgccgccgcgcttgtcctgaccgcagccgcg
ctcgtcgcctgcagcacgaccgaggcgactggacgtcccaaggcgcatgcggcagccggc
cgctcggcgccctcggccgataccctgtcccagcggtcgccggacgacatcttcgtgcaa
ctgcgtgaggccgcccgcagcaacgacgcgccgcgcgccaccgcgcttgccgccatgctc
accgactacgacgtgccgtcgtacgtccagtacttccagatcaagccgcgcatgttcgac
cggtcgggcaaggcgctcatcgatgcgccggacgacgaagtccgggccttcctgcgcacg
tacgacggtcaggccatcgccgatcgcatgcgcaacgactggctgctggtgctcggcaag
cgtcacgactggcagacgttcgacgccgagtatccaaaattcgtgctcgacgacgacacg
caggtcaagtgctacgcgctcatgtcgcgggcgtcgcgaggcgagaatgtcacgcaggcc
gccatggatctgctgaccacgccgaagcactacggcgagggttgcgtcgacatgatcaac
acgctcgccgcgagcggtcagttgccgcgcaaggaagtctggcatcagatccgtctggcg
tacgaggaaaactatacgtcgctgggcaagcagatcgccgacgcccttggcgccacacgc
ccggacgacacgctgctcgacatggcggccacgcgcccggcgcagatcctcgcgcgcggc
atcgacggcacggaaacctcgcgacagctggcgctgctcgccacggtgcgcatggcgcgc
tccgatgccatgctcgccgccagcagcttctccggcatcgccggcaacctgtcggccgac
gagcgtgccatcgggtggggggcgatcggcatgcgcggggcgctgtcgcagaatccgatg
gcgatcaactggtaccgccaggccggatcggccaagctctccaataccgcgcaggaatgg
aagatccgcgccgcgctgcgcgccggcgactggaacctcgttcgctcgggcatcgaggcc
atgcccgcatcgctgcgcgacgacggcgtgtggacctactggtacggccgagcgctgcgc
gaagccggccagggcgacgccgcacgtgcgcaattccagaagatcgccatgcaaccgaat
ttctacggtcaactggcgaacgaggaactgggcaacaagaccgcgttgccgccgcgcact
tccgtcaccagggcggaaatcgacgccaaccgctcgaaccccggcttcatccgcgccgcc
aagttctacgacctcggcctgcgcttcgaaggcaatcgcgagtggaactgggagttgcgc
aacatgaccgaccgtcagttgcttgccgccgcgcagtacgccaacaacatcgagttgttc
gaccgcgccgtcaacacggccgatcgcacgaaggtggagcacgatttcacgttgcgctac
ctgatgccgttccgtgccaaggtcgagccgctggccgctgccgtcgatctcgatgaggcg
tgggcctacggcctgattcgccaggagtcgcgcttcatcatcaatgcacgctcgtcggcg
ggcgccggcggtctgatgcagatcatgcccgcgaccgcgaagatggtggcccgccagatc
ggcatggattacacgccgggcatgatgcacgacatcgacaccaatatccggctgggcacg
agctatctctcggatatctacaacaagttcgacggctcggccgtgctcgcatcggccggc
tacaacgccggaccgggacgcccgcgcacgtggcgttccacgctcgatcgtccggtcgag
ggcgcgatcttcgcggagacgattccgttcaacgagacgcgtacctacgtcgagaacgtg
ttgtccaacaccacgtattactcggcgctcatcacggggcgtccgcaatcgctcaaggag
cggcttggcgtcatcctgccccagtga
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