Pandoraea pnomenusa DSM 16536: LV28_16275
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Entry
LV28_16275 CDS
T03411
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00280
Valine, leucine and isoleucine degradation
ppnm00650
Butanoate metabolism
ppnm00907
Pinene, camphor and geraniol degradation
ppnm01100
Metabolic pathways
ppnm01120
Microbial metabolism in diverse environments
ppnm04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LV28_16275
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LV28_16275
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
LV28_16275
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LV28_16275
Enzymes [BR:
ppnm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
LV28_16275
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Motif
Pfam:
HMGL-like
PRA-PH
Motif
Other DBs
NCBI-ProteinID:
AIU27901
UniProt:
A0A378YQJ2
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Position
5001508..5002437
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AA seq
309 aa
AA seq
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MSASPLPQRVKVVEVGPRDGLQNEKQPVPTDIKIALIDRLSAAGFANIEATSFVSPKWVP
QMADGAEVMAGIARRPGTIYSVLTPNMRGFEGAVAAKADEVVIFAAASEAFSQRNINCSI
EESIARFEPVARAAKDAGLRLRGSISCALGCPYQGEVPVASVVDVVKRLAALGCDEIDIA
DTIGVGTPSRTREVMEACARVFPIERLSGHFHDTYGQATANIYAALLSGISIFHSSVAGL
GGCPYAKGATGNVATEDVLYLLHGLGIATGIDLDAVVRTGDFISQAIGRPNASRVGRALL
AKMQDTAAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcatcccctttgccgcagcgtgtgaaagtggtcgaagtcggcccccgcgacggt
ctgcagaacgaaaagcagcccgtaccgaccgacatcaagatcgccctcatcgatcgactc
tccgccgccggcttcgccaatatcgaggccacctcattcgtctcgccgaaatgggtgccg
cagatggccgacggcgccgaggtcatggcgggcatcgcgcggcgtccgggcacgatctat
tccgtgctcacgccgaacatgcgggggttcgaaggcgccgtggcggcaaaggccgatgaa
gtggtgatctttgcggcggcgagcgaagcgttctcgcaacgcaacatcaactgctccatc
gaggagagcatcgcgcgcttcgaaccggttgcacgcgcggcgaaagacgccggactgcgt
ctgcgcggcagcatctcgtgcgcgcttggctgcccctatcagggcgaggtcccggtcgcg
agcgtggtcgacgtggtcaaacgcctcgccgcgctcggctgcgacgagatcgacattgcc
gacaccatcggcgtgggcacgccgtcacgcactcgcgaagtcatggaggcctgcgcccga
gtcttcccgatcgagcgcctgtccgggcacttccacgacacctacggtcaggcgacggcc
aacatctacgccgcgctgctctccggcatctcgatcttccactcgtccgtggccggactg
ggcggctgtccgtatgccaagggagcgacgggcaacgtggcgaccgaggacgtgctgtac
ctgctgcatggcctgggcatcgccacggggatcgacctcgacgccgtggtgcgcaccggc
gacttcatctcgcaggcgatcggacggccgaacgcttcgcgtgtgggtcgcgcacttctg
gcgaagatgcaggacaccgccgccgcctga
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