Pandoraea pnomenusa DSM 16536: LV28_16330
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Entry
LV28_16330 CDS
T03411
Name
(GenBank) 3-methylcrotonyl-CoA carboxylase
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm00280
Valine, leucine and isoleucine degradation
ppnm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
LV28_16330
Enzymes [BR:
ppnm01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
LV28_16330
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
BT_MCC_alpha
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATP-grasp_3
GCV_H
GARS_A
LAL_C2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
AIU27910
UniProt:
A0A378YQN4
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All DBs
Position
4988181..4990202
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AA seq
673 aa
AA seq
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MFDKILIANRGEIACRVAATAARLGIRTVAVYSDADAHAKHVAVCDEAVHVGGAAARDSY
LRIEAIIDAAKATGAQAIHPGYGFLSENEAFAAACQAAGIVFIGPPVGAIRAMGSKSAAK
TLMEGAAVPLVPGYHGDNQDTAFLHARADEIGYPVLLKASAGGGGKGMRVVEHSDAFRAA
LASCQREASSSFGDERVLVEKYLTRPRHIEIQVFADTHGNCVYLFERDCSVQRRHQKVLE
EAPAPGMTEGRRRAMGEAACNAARAVGYVGAGTVEFIANQDGSFYFMEMNTRLQVEHPVT
EMITGLDLVEWQLRVAAGEVLPRKQDELRIHGHALEARIYAENPDNNFLPSTGKLSTLRP
PASVQFEIGSGATPAAVRIDSGVREGDTISPFYDPMIAKLIVWGQDRDEALARMRRALGQ
YRVVGVQTNIAFLGRLVASEPFAGADLDTGLIERHRDTLFPAAAAAPATALALAVAAQLS
RETVTGRRKYQDSIDHHSPWQLATGWRLNGDYQRTMSFDHGETRRDVVLTSGAQASTLTV
DGQTYPYRYAHDGGVYRVTLGERRVQGHVDFEQETAHVFADGQSWTLRWHDPLAQAGGHE
GGEGRLTAPMPGKVIAVLAQVGAKVEKGAPLLVMEAMKMEHTISAPADGEIEEVLYAVGD
QVPEGAQLLAFKR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaagatcctcatcgccaaccgtggcgaaatcgcctgccgcgtggcagccacc
gccgcgaggctgggcattcgcaccgtggccgtctattccgatgccgacgcgcacgccaag
catgtggccgtatgcgacgaagccgtgcacgtcggcggggccgccgcacgcgacagctat
ctgcgtatcgaagccatcatcgacgccgccaaggccacgggcgcgcaggcgatccatccg
gggtacggcttcctgtccgagaacgaggccttcgcggccgcgtgccaggcggcaggcatc
gtcttcatcggcccgccggtgggcgccatccgggccatgggcagcaagagcgccgcgaag
acgctcatggaaggcgcggcggtgccgctcgttccgggctatcacggcgacaaccaggac
acggcgttcctgcacgcgcgcgccgacgagatcggctacccggtattgctcaaggccagc
gccggcggcggcggcaagggcatgcgcgtggtcgagcacagcgacgcgtttcgcgccgca
ctcgcgtcctgccagcgtgaggcgtcgagcagcttcggagacgaacgcgtgctggtggag
aagtacctgacgcgtccgcgtcacatcgaaattcaggtgttcgccgacacccatggcaac
tgcgtgtatctcttcgagcgcgactgctcggtgcagcgccgtcaccagaaggtgctggag
gaggcgcccgcgccaggcatgaccgaagggcgccgccgcgcgatgggcgaagcggcgtgc
aatgccgcgcgcgccgtgggctatgtcggtgcgggcacggtcgaattcatcgccaatcag
gacggctcgttctacttcatggagatgaacacccgcctgcaggtcgaacacccggtcacg
gagatgatcaccggcctcgatctcgtggagtggcaactgcgcgtggcggccggagaagtg
ctgccgcgcaagcaggatgaactgcgcattcacggtcatgcgctcgaggcgcggatctat
gcggagaatcccgacaacaacttcctgccgtcgaccggcaagctctcgacgctgcgtccg
cccgcgtcggtgcagttcgagatcggcagcggcgccaccccggccgccgtgcgcatcgat
tcgggcgtgcgcgaaggcgatacgatctcgccgttctacgatccgatgatcgccaagctc
atcgtgtggggccaggaccgcgacgaagcgctcgcccgcatgcgccgcgccctcgggcag
taccgcgtggtcggcgtgcagacgaacatcgcgttcctcgggcgtctggtcgccagcgag
ccgtttgccggcgccgacctggacaccggtctgatcgagcggcaccgcgatacgctgttc
ccggcagccgccgcggcgccggcaacggcgttggcgctggccgtggctgcgcaactctcg
cgcgagacggtgaccggacgtcgcaaatatcaggacagcatcgaccaccattcgccgtgg
caactcgccaccggctggcgcttgaatggcgactaccagcgcaccatgtccttcgatcat
ggcgagacgcgtcgcgatgtcgtgctcacgagcggcgcgcaggcgagcacgctcacagtc
gacggccagacctacccgtaccgctatgcccacgacggcggcgtgtatcgcgtgacgctg
ggcgagcggcgcgtgcagggccacgtcgatttcgaacaggaaacggcgcacgtgttcgcc
gacggtcagtcgtggacgctgcgctggcacgacccgctggcccaggccggcgggcacgaa
ggcggcgaaggccgcctgaccgcgccgatgccgggcaaggtcatcgccgtgctcgcgcaa
gtcggcgcgaaggtcgagaagggtgcgccgctgctcgtgatggaagcgatgaagatggag
cacaccatcagtgcccccgccgacggcgagatcgaggaagtgctgtacgcggtgggcgat
caggtgcccgaaggcgcgcaattgctcgcgttcaagcggtga
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