Pandoraea pnomenusa DSM 16536: LV28_16955
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Entry
LV28_16955 CDS
T03411
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppnm03021
]
LV28_16955
Transcription machinery [BR:
ppnm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LV28_16955
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
IF2_N
Motif
Other DBs
NCBI-ProteinID:
AIU28015
UniProt:
A0A378YT19
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All DBs
Position
4862951..4863889
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AA seq
312 aa
AA seq
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MSTAATLHPTTPATGTAPTSRALALAPSALMLPGSLGNIDSYIQAVNRIPLLSAEEEQSL
AKRLRENDDLEAARQLVLSHLRLVVSIARNYLGYGLPHADLIQEGNIGLMKAVKRFDPAQ
GVRLVSYAMHWIKAEIHEYVLKNWRTVKVATTKAQRKLFFNLRSQKQGLQAFTPEEIDQV
ARDLNVKREDVIEMETRMSGGDIALEGHSDDGESASFAPIAYLADSHQEPTAVIAARERD
HLQSDGLQTALGRLDPRSRRIIEARWLSVADDGSGGATLHELAEEFGVSAERIRQIEVAA
MKKMKGALQAYA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
ttgagtactgccgccactttgcatccgacgacgccggccaccggcacggcgccgacttcg
cgtgcccttgcgcttgccccgtccgcgttgatgctgccgggcagtctgggcaatatcgac
agctacattcaggccgtcaaccgcattcccctgctttccgccgaggaagagcagtcgctc
gccaagcgtctgcgcgagaacgatgatctggaagccgcccgccagttggtgctctcgcac
ctgcgtctggtggtgtccatcgcgcgtaactacctcggctacggtctgccgcacgcggat
ctgatccaggagggcaatatcggcctgatgaaggccgtgaagcgcttcgaccccgcccag
ggcgttcggctcgtgtcctacgccatgcattggatcaaggccgagattcacgaatatgtg
ctgaagaactggcgcaccgtgaaggttgccacgaccaaggcccagcgcaagctgttcttc
aacctgcgcagccagaagcaaggcctgcaagcgttcacgccggaagagatcgatcaggtc
gcccgcgatctgaacgtcaagcgcgaagacgtcatcgagatggaaacgcgtatgtcgggc
ggcgatatcgccctcgaaggtcacagcgacgacggcgagagcgccagcttcgctccgatc
gcgtacctggccgactcgcatcaggagccgaccgccgtcatcgccgcacgcgagcgcgac
cacctgcaaagcgacgggctgcaaaccgcgctcggccgactcgacccgcgcagccgtcgc
atcatcgaggcccgctggctgtcggtggccgacgacggcagtggcggcgccacgcttcac
gaactggcggaagaattcggcgtgtccgccgagcgcattcgccagatcgaggtcgccgca
atgaagaagatgaaaggcgcgcttcaggcctacgcataa
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