Pandoraea pnomenusa DSM 16536: LV28_17010
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Entry
LV28_17010 CDS
T03411
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppnm03009
]
LV28_17010
Enzymes [BR:
ppnm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
LV28_17010
Ribosome biogenesis [BR:
ppnm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LV28_17010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_25
MTS
Methyltransf_31
Methyltransf_11
Methyltransf_37
Methyltransf_12
Methyltransf_24
Methyltr_RsmB-F
Methyltransf_4
TRM
Methyltransf_30
UPF0020
SAM_MT
PrmA
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AIU28024
LinkDB
All DBs
Position
complement(4852079..4852684)
Genome browser
AA seq
201 aa
AA seq
DB search
MKSGAGNVARGAPQQVRIIGGQWKRTPLPVPPGDGLRPTPDRVRETLFNWLGQDLSGVQC
LDAFAGSGALGFEAASRGAVRVLMIEQAAPAVRQLRANQAKLGADQIEVVQADARRLITT
LAPGAFDVVFLDPPFASGWLHDLLAPAARLLAPGGVIYAESDIALEDDALAALGLACVRR
AKAGAVHYHLLESIPKTQRPQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccggcgcaggcaatgtcgcgcgcggcgctccccaacaggtgcgcatcatcggc
ggtcaatggaaacgcacgccgctgccggtgccccctggcgatggcttgcggccgacaccg
gaccgcgtgcgggaaacgctcttcaattggctcgggcaggacctgagcggcgtgcaatgc
ctggacgcgttcgccggcagcggggcgctcgggttcgaggccgcatcgcgcggcgccgtg
cgggtgctgatgatcgagcaggccgcgccggccgtgcgtcagcttcgcgccaatcaggcc
aagctgggcgccgatcagatcgaggtcgtgcaggccgatgcgcgacgcctgataaccaca
ctggcgcccggggctttcgacgtggtgtttctcgacccgccatttgccagcgggtggctg
catgatctgttggcgcctgcggcacgtctgctggcgccgggcggcgtgatctacgccgaa
tccgacatcgcgctggaagacgatgcgcttgccgcgcttggccttgcgtgcgtgcgccgg
gcgaaagccggagcggtgcattatcatttgcttgaatcgattccgaaaacccagagacca
caatga
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