Pandoraea pnomenusa DSM 16536: LV28_17070
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Entry
LV28_17070 CDS
T03411
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LV28_17070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppnm03400
]
LV28_17070
Enzymes [BR:
ppnm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
LV28_17070
DNA repair and recombination proteins [BR:
ppnm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LV28_17070
Prokaryotic type
LV28_17070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AIU28034
UniProt:
A0A378YT59
LinkDB
All DBs
Position
complement(4842630..4843799)
Genome browser
AA seq
389 aa
AA seq
DB search
MTESPENAGTDALAATFAERLIAWQAEHGRHDLPWQNTRDAYRIWLSEIMLQQTQVATVI
PYYTKFLERFPDVTALANAPQDDVMALWSGLGYYSRARNLHRCAQVVVAEHGARFPSDPQ
VLAALPGIGRSTAAAIAAFAYDAHAAILDGNVKRVLARVFGIEGFPGTPKIEREMWALAE
SLLPQRDLPAYTQGMMDLGATLCGRGKPRCGECPFDGDCVAHATGRERTLPTAKPKKAQP
QRYVDVLVVRAADRVLFERRPDSGIWGGLWSLPELTPPTDACAPDDAALRARLTALAVTL
AQGAENGLGAQEVAPSIVPLRGLTHVFTHFKLFLRPWLVTLPSASAAGSRHAWLDAPGMA
AAGLPSPIRKIADALSLTVQDDGQLRLPA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcccccgaaaacgcaggcaccgacgcgctggcggccacgtttgccgagcgc
ctgatcgcgtggcaggccgagcacgggcgtcacgacctgccgtggcagaacacccgcgac
gcctatcgcatctggctctcggagatcatgctccagcagacgcaggtcgccaccgtcatt
ccgtattacacgaaatttcttgaacgctttcccgacgtgacggcattggccaatgcgccg
caggacgacgtcatggcgctgtggagcgggcttggctactactcgcgggcgcgcaatctg
catcgttgcgcccaggtcgtggtggccgagcacggggcccgcttcccgtccgatccgcag
gtcctcgccgcgttgccgggcattggtcgttcgacggccgccgccatcgcggcgtttgcg
tatgacgcgcacgcggccattctcgatggcaacgtcaaacgcgtgctcgcaagagtgttt
ggcatcgaaggatttcccggcacgccgaagatcgagcgcgagatgtgggcgctggccgag
tcgctgctgccccaacgggatctgccggcctatacgcaggggatgatggatctcggcgcg
acgctttgcgggcggggcaagccgcgttgcggagagtgtccgttcgacggcgattgcgtg
gcgcacgccacgggccgcgagcgcacgttgccgacggccaagccgaagaaggcgcagccg
cagcgctatgtcgatgtgctcgtcgttcgtgcggccgaccgcgtgctgttcgagcggcgt
ccggacagcggcatctggggcggactgtggagtctgccggaactcacgccgccgacggat
gcctgcgcaccggacgatgccgccttgcgcgcgcgcctgacggcgcttgccgtgacactt
gcccagggcgcggagaacggcctgggcgcgcaggaagtggcgccgtcgatcgtgccgctg
cgggggctgacgcacgttttcacgcacttcaagctattcctgcggccgtggctcgtgacg
ctgccatcagcgtcggcagccggttcgcgtcacgcgtggctcgacgcgccgggcatggcc
gccgccggcttgccgtcgccgattcgcaagatcgccgacgcgctctcgctcaccgtgcag
gacgacggccaactacggttgcctgcgtga
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