Pandoraea pnomenusa DSM 16536: LV28_17100 Help Entry LV28_17100        CDS       T03411                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism ppnm  Pandoraea pnomenusa DSM 16536 Pathway ppnm02020   Two-component system ppnm02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:ppnm00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     LV28_17100  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     LV28_17100  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ppnm03021]     LV28_17100 Transcription machinery [BR:ppnm03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      LV28_17100 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_IclR DUF2939 Motif Other DBs NCBI-ProteinID:  AIU28040 UniProt:  A0A378YTJ4 LinkDB All DBs Position 4837329..4838816 Genome browser AA seq 495 aa AA seqDB search MKPTLQLRTSQHLTLTPQLQQSIRLLQLSTLELQQEVEHALTQNPMLEREDDWLAGSVRV GTDGSLRNERSTSASSASEGHESANGHDETRELDGQTRFDDSNQDSGSDWSLNDFARSGS ASDDDDNARPQLHVDHPNLREHLLAQLRLTKAGPRDRALVEFLIESLDEDGYLGTMLDEI QADMPEELALETEEINAALALLQSFDPAGVGARTPSECLRLQLQRLPPSNVRTLSLRIVS DHLELLAARDYTRLRRLLGVSEDSLRAAHHLIRSLDPFPGAAYGSPQADYVVPDVLVRKQ GSNWIAELNPEVMPRLRINEMYARILRNNRNDPGTGNLQQQLQEARWLIKNIQQRFDTIL RVAQAIVERQKNFFTHGEIGMRPLVLREIADTLGLHESTISRVTTSKYMLTPFGTFELKY FFGSHVATEAGGAASSTAIRALIKQLIGAEDPQSPLSDSRIAELLAEQGFVVARRTVAKY REAMRIPAVNLRKSL NT seq 1488 nt NT seq  +upstreamnt  +downstreamnt atgaaaccgactcttcaactccgcacctcgcagcacctgaccctcacgccgcagttgcag caatccatccggttgttgcaactgtcgacgctcgaacttcagcaggaagtcgagcacgcc ctcacccagaacccgatgctcgagcgcgaggacgactggctcgcgggctcggtacgtgtc ggcacggacgggtcgcttcgcaacgagcgcagcacgtcggcgagcagcgccagcgagggc catgagtccgccaacggccatgacgaaacccgcgagctcgacggccagacccgcttcgac gacagcaaccaggacagcggcagcgattggagtcttaacgatttcgcccgttcgggcagc gcctcggacgacgacgacaacgcgcgcccgcagttgcacgtcgatcaccccaaccttcgc gaacacctgctcgcgcagctgcgcctgaccaaggcggggccgcgcgatcgcgcgcttgtc gaattcctgatcgaatcgctcgacgaagacggctacctcggcaccatgctcgacgaaatc caggcggatatgcctgaagagctggcgctcgagaccgaggagatcaacgcggcgctcgcg ctcctgcagagcttcgatccggccggtgtgggtgcccgtacgccgtccgaatgcctgcgc cttcagttgcagcgcctgccgccgagcaatgtgcgcacgctctcgctgcgcatcgtctcg gatcacctggaactgctcgccgcgcgcgattacacgcgtttgcgtcgcctgctcggcgtg agcgaagacagcctgcgcgcggcgcatcacctgattcgctcgctcgaccctttccccggc gcggcctacggctcgccgcaggccgattacgtggtgcccgacgtgctggtgcgcaagcag ggcagcaactggatcgccgaactcaaccccgaggtcatgccgcggctgcgcatcaatgag atgtacgcgcgaattctgcgaaacaaccgcaacgatccgggcaccggcaatctgcagcaa cagctccaggaagcccgctggctgatcaagaacatccagcaacggttcgacacgatcctg cgtgtcgcacaggcgatcgtcgagcgtcagaagaacttcttcacgcacggcgaaatcggc atgcggcccttggttttacgcgagattgctgatacgctgggtttacatgaatccacgatt tcacgggtgacaaccagtaagtacatgctcactccattcgggactttcgagctcaagtac ttctttggttcgcacgtggccacggaggcgggcggcgcagcgtcatcgacggccatccgc gcactcatcaagcaactcataggagcagaagacccgcagagccccctttccgacagccgt atcgcggaactgctggcagagcaagggttcgtggtggcgcggcgcactgtcgcgaagtac cgcgaggccatgcgaatccccgcagtcaacttgcgcaaatctttgtag

DBGET integrated database retrieval system