Pandoraea pnomenusa DSM 16536: LV28_17690
Help
Entry
LV28_17690 CDS
T03411
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_17690
Transporters [BR:
ppnm02000
]
Other transporters
Pores ion channels [TC:
1
]
LV28_17690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AIU28150
LinkDB
All DBs
Position
4707257..4709308
Genome browser
AA seq
683 aa
AA seq
DB search
MALALASLGGAAHALTTGPEATLPVTVVTAPPESLTSPSVDLQKAELFQTVGAVGFVDAD
SYQNTYAFNLRDILKDSPGVYVQNRYGQEIRVSIRGSGIARGYHARGLEILQDGIPTNAA
DGSGDYYQIDPLGLRSTEVYKGGNGLTYGATTLGGALNFVTPTAYTADAPNQLRIDGGSF
GTIRASAQMSRIFGPLDALATVTVNRADGYRDHDRGNYAQINANVGYKFSPRVETRFFFG
AYLVDQKLPGTLSLFDALNHPTKAAASAVSGDQARNIRTERLGNLTTVRFATGQLDVASW
VIHKSLYHPIFQVIDQDGWTYGVAPRYTANLTLAGMRNDLIVGARFFGGNTSANQYTNVN
GNRGAQTLDARQSAYNYEAYFENRWFFLPTLGLMVGAKAFRDVRQYIDYGGLAGDPNYRS
TSAAYSGVNPKIGLLWEPSKDVQAFVDVTRSADVPDFTDLSQTFGATSRFVPLASQHAWT
IEAGTRGKLDRVAWDVTAYRSLVRDQLLQYTTSADIPASTFNANKTVLQGLEIGASVDLF
RNLAATGDRITLSQLWNYSDFRFRDDPQYGNNRIAGVPTHVLRTTLGYALSNRFQVAASL
DWVPTGAWVDYANTLRVPGYSLIGLQASYLVQRGVTLYVDARNLTDKRYVTDFSTVTDAR
TANTAVFYPGDGRSVFAGVRFAF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atcgcactcgcccttgcctcgctgggcggtgcagcacacgcactgacgaccggccccgag
gccacattacccgtgacggtggtgaccgccccgcccgaatcgctcacttcgccgagcgtg
gacttgcaaaaagccgaactgttccagaccgtcggcgccgtcggtttcgtcgacgccgac
tcgtaccagaacacctacgccttcaatctgcgcgacattctcaaggacagcccgggcgtc
tatgtgcagaatcgatacgggcaggagatacgcgtctcgattcgcggctcggggatcgcc
cgcggctatcatgctcgcggactcgagatcctgcaggacggtattccgacgaacgccgcg
gacggcagcggcgactactaccagatcgatccgctgggcctgcgctcgaccgaggtctac
aagggcggcaacggtctgacctacggtgcgaccacgctgggcggcgcactcaacttcgtc
acgcccaccgcctacacggcggatgcgcccaaccagttgcgcatcgatggcggcagcttc
ggcaccatacgtgcgagtgcgcagatgtcacgcatcttcggccccctcgatgcgctcgct
accgtgaccgtcaatcgcgccgacggctatcgcgatcatgacaggggcaactacgcccag
atcaacgccaacgtcggatacaagttctcgccgcgcgtcgagacccgcttcttcttcggc
gcctacctcgtcgaccagaagctgccgggcacgctgtcgctgttcgatgccctgaaccat
ccgacaaaggcggccgcatcggccgtctccggcgatcaggcacgcaacattcgcaccgaa
cgcctgggcaacctgacgacggttcgctttgcgactggccaactcgacgtcgcttcgtgg
gtgatccacaagagcctctatcacccgatcttccaggtcatcgatcaggacggctggacg
tatggcgtggcgcctcgctacaccgccaacctcacgctcgcgggcatgcgtaacgacctg
atcgtgggcgcgcgcttcttcggcggtaacaccagcgccaaccaatacacgaacgtgaac
ggcaatcggggcgcccagacgctcgacgcccgtcagagcgcgtacaactacgaggcctac
ttcgagaaccggtggttcttcctgccgacgctgggcctgatggtaggcgccaaggccttt
cgggacgtacgacaatacatcgactacggcggtctggccggcgaccccaactaccggtcg
acgagcgccgcctattcgggagtgaatccgaagatcggcctgctttgggagcccagcaag
gacgtacaggcattcgtcgacgtcacccgcagtgccgacgtccccgacttcaccgacctg
tcgcagacgttcggcgccacgtcgcgcttcgtaccgctcgcctcgcagcatgcctggacg
atcgaggccggcacccgcggcaagctcgatcgcgtggcatgggatgtcaccgcctatcga
tccctggtgcgcgatcagttgcttcagtacaccacgtccgccgacattcccgcgtcgacc
ttcaacgccaacaagaccgtgctccagggtctggagatcggcgcgtcggtcgacctgttc
aggaacctcgccgccaccggagaccgcatcacgctgtcacaactctggaactacagcgac
ttccgcttccgggacgatccgcaatacggcaacaatcgcattgccggtgttcccacccat
gtgttgcgcacgacactcggctatgccctgtcgaaccgcttccaggtcgccgcatcgctc
gattgggtgccgaccggtgcatgggtggattacgccaacaccctgcgcgtgcctggttac
tcgctgatcggcttgcaggcatcgtatctggtgcagcgcggggtcaccctctatgtcgac
gcgcgcaacctgaccgacaaacgctacgtcaccgacttcagcacggtgaccgacgcgcgc
accgccaacaccgccgtcttctatccgggagacggtcgcagcgtattcgcgggcgttcgg
ttcgcgttctga
DBGET
integrated database retrieval system
