KEGG   Pandoraea pnomenusa DSM 16536: LV28_18655
Entry
LV28_18655        CDS       T03411                                 
Name
(GenBank) secretion system apparatus protein SsaV
  KO
K03230  type III secretion protein V
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Pathway
ppnm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LV28_18655
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppnm02044]
    LV28_18655
Secretion system [BR:ppnm02044]
 Type III secretion system
  Type III secretion core apparatus
   LV28_18655
SSDB
Motif
Pfam: FHIPEP Phage_TAC_11
Other DBs
NCBI-ProteinID: AIU28319
LinkDB
Position
complement(4494448..4496523)
AA seq 691 aa
MNRTRRVSDWLRAAAGRQDIVLAALLLVTVLMIIIPMPPSVMDLLIALNLGVSLLLLMVA
LYINEPLDFSAFPSVLLMTTLFRLGLTISTSRLILLHADAGDIVYTFGDFAAGGNIVVGM
IVFLIITIVNFIVITKGSERVAEVGARFSLDGMPGKQMSIDGDLRAGTIDAGEAKRLRRV
VQKESQFYGAMDGAMKFVKGDAIAGLVIIVVNLLGGIGVGVFMRGMSAGDAAAIYAILSI
GDGLVSQIPALLISVTAGIIVTRVPGEHRRNLARELTDQLAAQPRSLTLAAVVMLLFGLI
PGFPMHYFLLLAALAGSGAWWVGRGQRAAAAAHADPGSTPNANGGRPGAQPLLARVGAGL
ADPEGGVATLAARIDALRHEKFEQFGVPMPEVAVVVDAALADGTLDIQLYHESVMTLEVM
PGEALARHDVSHPIPALRNLAAGAPRETPLPFGGQVLFWLDDAQRDAWRGQGGAVLEGAD
RVAHCVSLVIDAHAADFLGVQEARYLMDGMEDRYGELVKELQRQLPISRTAEVLQRLVAE
GVSIRDLRRVFEALIEWAPRERDQIMLTEYVRLSLRRHITRRFRRGAEHITGWNVGRGIE
DTVRAAVRQTSSGSYADLSHEQTDAILEALDGAMQAHDGTPAVLLTAMDVRRFVRKLIER
ERADLPVLSFQEVADEPHVRVLGTIDLQGAH
NT seq 2076 nt   +upstreamnt  +downstreamnt
atgaaccgcacgcgacgggtgagcgactggcttcgcgccgccgcggggcgacaggatatc
gtcctggccgcgctgctgctcgtgaccgtactgatgatcatcatcccgatgccgccgtcg
gtgatggatctgctcatcgcgctcaatctcggcgtatcgctgttgctgctgatggtggcg
ctctacatcaacgagcccctggacttctccgcattcccgtccgtgctgctgatgaccacg
ctgttccgcctcggcctcacgatcagcacgagtcgcctgatcctgctgcacgccgacgcg
ggcgatatcgtctacaccttcggcgacttcgcggcgggcggtaacatcgtcgtgggcatg
atcgtgtttctcatcatcaccatcgtgaacttcatcgtgatcacgaaaggctcggagcgg
gtggccgaagtcggtgcccgtttctcgctcgacggcatgcccggcaagcagatgagcatc
gacggcgatctgcgcgcgggcaccatcgacgctggcgaagccaagcgcctgcgacgcgtc
gtgcaaaaggagagccagttctacggtgcgatggacggggcgatgaagttcgtcaagggc
gacgccatcgcggggctcgtcatcatcgtggtcaatctcctcggcggcatcggcgtgggc
gttttcatgcgcggcatgagcgccggagacgcggccgcgatctacgccattctttccatc
ggcgacgggcttgtctcgcagattccggcgctgctgatctcggtgacggccggcatcatc
gtgacgcgcgtgccgggcgagcaccgccgcaacctcgcgcgcgagttgaccgatcaactg
gcggcccagccgcgttcgctgacactcgccgcggtggtcatgctgctcttcggcctgatc
ccgggctttccgatgcattacttcctgctgctcgccgcgctcgccggtagcggcgcctgg
tgggtcgggcgcggtcagcgcgcggccgcggcggcgcatgccgacccgggaagcacgccg
aacgccaacggcggacgtcctggagcgcaaccgctgctggcgcgtgtcggcgcgggactg
gcggacccggagggcggtgtcgcgacactggccgcgcgcatcgacgccttgcgtcacgag
aagttcgagcagttcggcgtgccgatgccggaggtggcggtcgtcgtcgatgccgcgctc
gccgacggcacgttggacatccagctgtatcacgagagcgtgatgacgctcgaggtgatg
cccggcgaggcgctggcgcgccacgatgtttcgcatccgatcccggcactgcgcaatctt
gccgcgggcgcgccgcgcgagacgccgctgccgttcggcggccaggtgttgttctggctc
gacgacgcgcagcgcgacgcgtggcggggacaggggggcgcggtgctcgagggcgccgat
cgcgtggcgcactgcgtctcgctggtgatcgacgcgcacgcggcggactttctgggcgtg
caggaggcgcgctatctgatggacggcatggaagatcgctacggcgagctggtcaaggag
ctgcaacggcaactgccgatcagccggacggcggaagtgctgcagcgcctggtggccgaa
ggcgtctcgatccgcgatcttcggcgggtgttcgaagcgctgatcgaatgggcgccgcgc
gagcgcgatcagatcatgctgacggagtatgtgcggctgagtctgcgccgccatatcacg
cggcgttttcgccggggcgccgaacacattaccggatggaacgtgggccgcggcatcgag
gacacggtgcgggcggcggtgaggcaaacgtcgtcgggttcgtacgccgacctgagccac
gagcagaccgacgcgattctggaagcgctcgacggtgcgatgcaggcgcatgacggcacg
cccgcggtgctcctcaccgcgatggatgtgcggcgcttcgtgcgcaagctgatcgagcgc
gagcgcgccgacctgccggtgctgtcgttccaggaagtggcggacgagccgcatgtgcgc
gtgctcggcacgatcgacctgcagggagcgcactga

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