KEGG   Pandoraea pnomenusa DSM 16536: LV28_19490
Entry
LV28_19490        CDS       T03411                                 
Name
(GenBank) Low calcium response locus protein D
  KO
K03230  type III secretion protein V
Organism
ppnm  Pandoraea pnomenusa DSM 16536
Pathway
ppnm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ppnm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LV28_19490
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ppnm02044]
    LV28_19490
Secretion system [BR:ppnm02044]
 Type III secretion system
  Type III secretion core apparatus
   LV28_19490
SSDB
Motif
Pfam: FHIPEP Gal4_dimer NitrOD1
Other DBs
NCBI-ProteinID: AIU28455
UniProt: A0A378YW00
LinkDB
Position
4329464..4331569
AA seq 701 aa
MPTLHRKLQRLVEFITSRNDLILAVVVVGIIFMMILPLPTPLVDALIATNMSLSAILLMV
AMYLPSPLAFSSFPTVLLVTTLFRLGISIATTRLILLNGDAGHIVDTFGNFVVGGNLVVG
LVVFLILTIVQFVVITKGAERVAEVAARFSLDAMPGKQMSIDGDLRANTIDMEEAKRRRA
IVEKESQLYGAMDGAMKFVKGDAIAGLIIVAVNLVGGMIIGTVQRGLSASEAVHIYSILT
IGDGLIAQIPALFIAICAGMIVTRVSSDTGKPSNIGRDIGEQILARPRPLLIGASTMLGM
ALIPGMPTLTFLGLAVLIGSVGYGLSQPKRRGKDSPEGIDDMPGAQGDAAKDKSGAVSDD
ELTPTVPLLLDVAEDLRRSFSAKQLNEELIAIRRALYFDLGVPFPGIQLRFNQNLPAGTY
SILLSEVPVAEGRLRPDHILVRESRNNIAALGVEIEEEAQFLPHLQSLWARSELRARLTD
AGIQCMDNAQILGYHLSFVLKKHAADFIGIQETRALLTSMESRFSELVKEVTRIMPLQKI
AEILQRLVSESISVRNLRAIMESLIEWGQKEKDSVLLTEYVRGTLKRQICHRHTSGQNAL
PAYLLAPDLEEVIRGAVRQTSGGSYLALDPNLSKRVVEQVRETVGDSMALLHPPVLLTSM
DIRRYVRKMVEAECHDLHVLSYQELTPDINIQPLARIEVAA
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgccaacgctgcaccgaaaactacaacgtctggtggaattcattaccagccggaatgac
ctgatcctggcagtggtggtcgtgggcatcatcttcatgatgatccttccgctgccaacg
ccacttgttgacgcactaatcgccaccaacatgagcctctcggccatcctgctgatggtc
gcgatgtacctgccttcaccgctcgcattctcctcatttcccacggtgcttctggtgacc
acgctgttccggctggggatcagcatcgccaccacacggctgatcctgctcaatggcgat
gccggacacatcgtggataccttcggcaatttcgtcgtcggcggcaacctggtcgtcggc
ctggtggtgtttctgattctcacgatcgtgcagtttgtcgtgatcaccaaaggggccgag
cgggtggccgaagtggccgcgcgcttctcgctcgacgccatgcctggaaagcagatgtcg
atcgacggcgatcttcgcgccaacactatcgacatggaggaagccaaacgtcgacgcgcc
atcgtcgagaaggagagccagttgtacggcgcgatggacggtgcgatgaagttcgtcaag
ggagacgccatcgccggcctgatcatcgtggccgtcaacctcgtcggcggcatgatcatc
ggcaccgtgcagcgcggtctaagcgcctccgaagccgttcatatctactcgatcctcacc
atcggcgatggcttgatcgcgcagattccggcattgttcatcgccatctgcgcaggcatg
atcgtgacgcgcgtgtcatcggatacgggcaaacccagcaacattggccgcgatatcggt
gagcagatcctcgctcgcccacgcccgttgctcatcggtgcctcgacgatgctcgggatg
gcgttgatcccgggtatgcccaccctgacgttcctcggtcttgccgtcctgatcggcagc
gtcggttatggactgtcgcagccaaagcgacgcgggaaggacagccctgagggcattgac
gacatgcccggcgcgcagggcgacgcggcgaaagacaagagcggcgctgtctcggatgac
gaactgacccccaccgtgccgctcttgctcgacgtcgccgaggatttgcgcagaagtttc
agcgcgaaacaattgaacgaagagctcattgcaattcgacgcgcactttacttcgatctt
ggggtgccatttcccggtattcaacttcgcttcaatcagaaccttcccgcaggcacctac
agcattctcctctcggaagtgcctgtcgccgagggtcggctgcgtcccgatcacattctg
gtcagggagagccgcaacaacatcgccgcgctcggggtggagatcgaagaagaggcgcag
ttcctgccacaccttcaaagcttgtgggcacgcagcgagctacgcgcacggctcaccgac
gccggcattcagtgcatggacaacgcgcagatcctgggctaccacctctcgttcgtgctc
aagaaacacgccgccgactttatcggtatccaggaaacgcgcgcgttgctgacgtcgatg
gagtcgcgattctccgaactcgtcaaggaagtcacgcggatcatgccactgcagaagatc
gcggagatcctccagcggctggtttccgagagcatctcggtgcgaaatctgcgtgccatc
atggagtcgctgatcgagtggggacaaaaggagaaggattccgtgctgctcacggagtac
gttcgtggcaccctcaagcgccagatctgtcatcgccacacgagcgggcaaaacgcgctt
ccggcctatctcctggcccccgatctggaagaggtcattcgcggcgccgttcggcaaact
tccggcggcagctatctcgcgctcgaccccaatctttccaagcgcgtggttgaacaggtt
cgcgaaaccgtgggcgacagcatggctttactgcacccgcccgtgctgcttacttcgatg
gatattcggcgatacgtgagaaaaatggtcgaggcggaatgccacgacctgcatgtgttg
tcgtatcaggaattgacgcccgacatcaatattcagcccctcgcacgcatcgaggtcgcg
gcatga

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