Pandoraea pnomenusa DSM 16536: LV28_19845
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Entry
LV28_19845 CDS
T03411
Symbol
dppD
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_19845 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_19845 (dppD)
Transporters [BR:
ppnm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
LV28_19845 (dppD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
nSTAND1
AAA_5
Motif
Other DBs
NCBI-ProteinID:
AIU28509
UniProt:
A0A378YU95
LinkDB
All DBs
Position
complement(4261124..4262155)
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AA seq
343 aa
AA seq
DB search
MTMPANAGPVLEVAGLSLKFSQAPDAPNLIDGVSFAVHPGKTLCIVGESGCGKSVTSLAL
MGLLPSPPANLVAGRAMFEGQDLLALRERDFADLRGNRLAMIFQEPMTSLNPAFTIGHQI
EEGIRRHRGLDRRAARAEALEMLKRVRIPAPETRLDNYPHELSGGMRQRVMIAMALANRP
ALLIADEPTTALDVTIQAQVLTLIQTLQRETGTAVVLITHDLGVVAEVADDVAVMYAGRI
VEYGTVDEIFDDPQHPYTIGLMGAIPSIGKREGTLATIRGAVPPPERMPAGCRFAPRCPF
AEARCTREAPVERTLSGSHRVACWLAPVEALIPPSTPREEVVA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgcccgccaacgccggaccggtgctcgaagtcgccggactgtcgctgaagttc
agccaggcgcccgacgcgcccaatttgatcgacggtgtttcgttcgccgtgcaccccggc
aagacgctgtgtatcgtcggcgaatcggggtgtggcaagagcgtgacgtcgctcgcgctc
atggggctgttgcccagcccgccggcgaacctggtggctggccgcgccatgttcgagggc
caggatctgctcgcgttgcgcgagcgcgactttgccgatctgcgcggcaatcgtctcgcg
atgatctttcaggagccgatgacctcgctcaatccggcgttcaccatcggtcatcagatc
gaagagggaattcgccgccatcgcggactggacaggcgtgccgcacgcgccgaggcgctc
gaaatgctcaagcgggtgcgcattcccgcgcccgagacacggctcgataactatccgcac
gaactctccggcggcatgcgccagcgcgtgatgatcgccatggcgctcgccaaccgtccg
gcgctgctcatcgccgacgagccgaccaccgcgctcgacgtgaccattcaggcgcaggtg
ctcacgctcatccagacgttgcagcgcgaaaccgggactgccgtcgtgctgatcacgcac
gacctgggcgtggtcgcggaagtggccgacgacgtcgctgtcatgtacgccgggcgcatc
gtcgagtacggcacggtcgacgagatattcgacgacccgcagcatccttacacgattggg
ttgatgggggcgattccgtccatcggcaagcgggaaggcaccctggcgacgattcgcggg
gcggtgccgccccccgagcgcatgccggcgggctgccgtttcgcgccgcgctgcccgttt
gccgaagcgcgttgcacgcgcgaggcccccgtcgagcggacgctgtcgggttcgcatcgg
gtggcgtgctggctcgcgcccgtcgaagcgctcatccccccgtccaccccgagggaagag
gttgttgcatga
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