Pandoraea pnomenusa DSM 16536: LV28_20290
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Entry
LV28_20290 CDS
T03411
Symbol
livF
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01996
branched-chain amino acid transport system ATP-binding protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm02010
ABC transporters
ppnm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LV28_20290 (livF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_20290 (livF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_20290 (livF)
Transporters [BR:
ppnm02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
LV28_20290 (livF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_23
AAA_25
TsaE
NB-ARC
AAA_16
RsgA_GTPase
nSTAND3
NACHT
AAA_30
AAA_15
MukB
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AIU28588
UniProt:
A0A378YVV6
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All DBs
Position
4156566..4157267
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AA seq
233 aa
AA seq
DB search
MLKLEQIHTHYGAVEALSGVSIEVNKGEIVTLIGSNGAGKTTLMMTVCGTPRASSGRVMF
EGNDITGCPTHEIMRMGLAISPEGRRVFPSLTVIENLKMGGFFASKDDIDAGMDHVFKLF
PRLAQRGKQRAGTMSGGEQQMLAIGRALMSRPRLLLLDEPTLGLAPLVIAQIFDIIRAIR
EEGVTVFLVEQNANKALHVADRGYVLETGRVVLADSAANLLANDDIKRAYLGA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagctggaacagatccacacccactacggggccgtcgaggcgctctcgggcgtg
tcgatcgaagtgaacaagggcgagatcgtcacgctcatcggcagcaacggcgccggcaag
acgacgttgatgatgaccgtgtgcggcacgccgcgcgcctcgagcggacgcgtgatgttc
gaaggcaacgacattaccggctgccccacgcacgagatcatgcgcatgggcctggcgatc
tcgccggagggccgtcgcgtgttcccgagcctgaccgtcatcgaaaacctgaagatgggc
ggtttcttcgcgtcgaaggacgacatcgacgccggcatggaccacgtcttcaagctgttt
ccgagactcgcgcaacgcggcaagcagcgcgccggcacgatgtcgggcggcgagcagcaa
atgctggcaatcgggcgggcgctgatgagccgtccgcgcctgttgttgctcgacgaaccg
acgctcggcctcgcgccgctcgtgatcgcacagatcttcgacatcattcgcgcgatccgc
gaggaaggcgtgaccgtgtttctggtggagcagaacgcgaacaaggccctgcacgtggcc
gaccgcggttacgtgctcgagaccggacgcgtcgtgctcgccgactcggccgcgaatctg
ctggcgaacgacgacatcaagcgcgcctatctcggcgcctga
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