Pandoraea pnomenusa DSM 16536: LV28_20935
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Entry
LV28_20935 CDS
T03411
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppnm01011
]
LV28_20935
Enzymes [BR:
ppnm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LV28_20935
Peptidoglycan biosynthesis and degradation proteins [BR:
ppnm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LV28_20935
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Paralog
GFIT
Motif
Pfam:
SLT_2
SLT
Motif
Other DBs
NCBI-ProteinID:
AIU28701
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All DBs
Position
4011032..4012255
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AA seq
407 aa
AA seq
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MYDSLSPARSRLAPRPEMAGNPCRATDAPGSPRHSTRAAFSRTARTFGVVLSLCLGTFAL
TTTAAHAQTRGKQVAQTEFEEEVVPQRYAANPEVDAFINDIVARDGFDRAELQRVFSRVV
FSQTAARLAAPPATPGQKNWTRYEKNFLDNTRINGGVRFWNQNAAALSRAAQQFGVPEEI
IVAIIGVETIYGRHMGNFRTIDALTTLAFDYPPARNRSERMALFRTELENLLLYARERGV
DPFSIYGSYAGAIGIPQFMPSSIRNYAVDFSGDGKINLTTDVADAIGSVANFLKQHGWQA
GQPVVWNIANDRGSQGLAEAGADGQPEPHWKLGDFIKAGMLMNEPRLDVGAKLDTPVLIV
DLPTPGQPTQYRMGLNNFYVLTRYNRSFFYAMSVYDLADAIKAARAP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgtacgattcactctcgccggcgcgctcgcgcctcgcacctcgaccggaaatggccggc
aacccctgccgcgcgaccgacgcccctggctcgccccggcactcaacacgcgctgcgttc
tcgcgtactgcacgcaccttcggcgtcgtcctgtcgctgtgcctcggcacgttcgcgctc
acgacgaccgccgcgcatgcgcagacacgcggcaagcaggttgcgcagaccgagttcgag
gaggaagtcgtgccgcagcgctacgcggccaatcccgaagtcgacgcgttcatcaacgac
atcgtggcgcgtgacggcttcgatcgcgccgagttgcagcgcgtgttctcacgcgtggtc
ttctcgcaaacggccgctcgcctggccgcgccgcccgccacgcccggccagaaaaactgg
acccgctacgagaagaatttcctcgacaacacgcgcatcaatggcggcgtgcgcttctgg
aatcagaatgcggccgcgctgtcgcgagcggcccagcaattcggcgtgcccgaggaaatc
atcgtcgccatcatcggcgtcgagacgatctacgggcgccacatgggcaacttccgcacc
atcgacgcgctcactacgctcgcgttcgactacccgcccgcgcgcaaccgatccgagcgc
atggcgctgttccgcaccgagctggagaacctgctgctgtacgcccgcgagcgcggcgtc
gaccccttcagcatctacggctcatatgcgggcgccatcggcattccgcagttcatgccc
tcgtcgattcgcaactacgccgtcgacttctcgggcgacggcaagatcaatctgacgacc
gacgtggcggacgccatcggcagcgttgcgaacttcctcaagcaacatggctggcaggcc
ggtcaacctgtcgtctggaatatcgccaatgatcggggcagccaggggttggccgaggcc
ggcgcggacggacaaccggagccgcactggaaactcggcgacttcatcaaggcaggcatg
ctgatgaatgagccacggctcgacgtgggggcgaagctcgacacgccggtgctcatcgtc
gacctgccgacgccgggccagccgacgcaatatcgcatgggcctgaacaacttctacgtg
ctcacgcgttacaaccggagcttcttctacgcgatgtcggtgtacgacctcgccgacgcg
atcaaggcggcacgcgccccctga
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