Pandoraea pnomenusa DSM 16536: LV28_21625
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Entry
LV28_21625 CDS
T03411
Name
(GenBank) DNA-binding protein
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppnm03000
]
LV28_21625
Transcription factors [BR:
ppnm03000
]
Prokaryotic type
Helix-turn-helix
GntR family
LV28_21625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
HTH_Crp_2
Rrf2
Motif
Other DBs
NCBI-ProteinID:
AIU28820
UniProt:
A0A378YY71
LinkDB
All DBs
Position
3845080..3846546
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AA seq
488 aa
AA seq
DB search
MQILLSDLILQHLEPNAEIPRNRQLYNIVRASILDGRLPGGTRLPASRDLARELAISRNT
VLYAYEQLRAEGYVRSRTGDGTFVTDAIPEESMATRPGRTPDAPPDAEVNLSQRGRGLIL
NARASRRQAGAFMPGVPDLDAFPLKQWTRLVERHWRRRTPENLTYGYGGGHPALKKALAQ
HLRSARSVACEPEQIIITEGIHQAIHLCVQMLTDVRHRAWVEDPGYWGIHKVLQAYGVET
ISIPVDAEGLSPSPADWRKPPRLIFVTPSHQYPLGHVMSLARRRQLLQYARKHDAWIVED
DYDSEFRYAGRPIASLQGLEPGARVLYAGTFSKTLFPGLRIGYLVVPKAMVEPLQLGIAE
LYREGRWMDQAVLADFIGEGYYSAHIRRMRLIYGRRRALLQDAIRRHMGDARLISADSNA
GLHLTVRLAPEVDDVSLSARAQELGLIALPLSRYYLEQPPLRGLVLGYGCVPDDDIEPSL
ARLASLLA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcagattctgctgtccgatctgatccttcagcatctcgaaccaaacgcggagattccg
cgcaaccggcagctgtacaacatcgtgagagcgtcgattctcgacggacgtctgccgggc
ggcacccgactgcccgcctcgcgcgatcttgcacgcgagttggccatctcccgaaacacg
gtgctgtacgcgtacgagcagttgcgcgccgagggctacgtacgctcacgcaccggcgac
ggcacgttcgtgaccgacgcgattccggaggagtccatggcaacccggccaggtcgcacg
cccgacgcgccgccggatgcggaggtcaacctctcgcaacgtggccggggccttatcctc
aacgcgcgagcgtcgcggcgtcaggccggtgccttcatgcccggtgtgcccgacctcgac
gcctttccgctcaagcaatggacacgtctggtcgagcggcactggcgtcgccgcacgccg
gagaatctgacctacgggtatggcggcggtcaccccgcgctcaagaaagcgcttgcccag
catttgcgctcggcccgctcggtggcctgcgaacccgagcagatcatcatcaccgagggc
attcatcaggcgattcatctgtgcgtgcaaatgctcacggacgttcgccaccgcgcctgg
gtggaagaccccggctactggggcattcacaaggtgctccaggcgtatggcgtggagacg
atctcgatcccggtcgacgcggaagggctcagtccttcgcccgccgactggcgcaagccg
ccgcgcctgatcttcgtcacgccctcgcaccagtatccgttgggccatgtgatgtcgctc
gcgcggcgccgacagctattgcagtacgcccgcaagcacgacgcgtggatcgtcgaagac
gactacgacagcgaatttcgctacgccgggcgcccgatcgcgtcgttgcagggcctggag
ccgggggctcgcgtgctctatgccggcacgttcagcaaaaccttgttcccggggttgcgc
atcggctatctggtcgtgcccaaggcgatggtcgagcccctgcagctgggcatcgcggaa
ctctaccgcgagggtcgatggatggatcaggcggtgctggccgacttcatcggcgaaggg
tattattccgcgcacattcgccgcatgcggctcatctacggtcggcggcgggcattgctt
caggacgccatccgccggcacatgggagatgcgcggctcatatccgccgacagcaatgcg
ggcttgcacctgacggtcaggctcgcgcccgaggtcgacgacgtctcgctgtccgcacgt
gctcaggaactcggcctgatcgcattgccgctgtcccgctattatctggagcagccgccg
ctgcgcggactcgtgctcggctacggatgcgtgcctgacgacgacatcgagccgtctctg
gccagactcgcatcgctgctggcgtga
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