Pandoraea pnomenusa DSM 16536: LV28_21635
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Entry
LV28_21635 CDS
T03411
Name
(GenBank) ABC transporter permease
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ppnm
Pandoraea pnomenusa DSM 16536
Pathway
ppnm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppnm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LV28_21635
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppnm02000
]
LV28_21635
Transporters [BR:
ppnm02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
LV28_21635
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPD_transp_1
DUF7987
Motif
Other DBs
NCBI-ProteinID:
AIU28822
LinkDB
All DBs
Position
complement(3842870..3843697)
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AA seq
275 aa
AA seq
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MHKLRPYLLLAPLAAFLTAFFLMPLAQVLWLSFTEPTPGFANYVHFFADPFYLRVLGMTF
LTSLLVTACCLVLGYPLAYCLAQATARFGAGILLVVGMSYWTSFLVRSYAWMIILGNSGP
IVGLFRMLGVQTPPELLFTRFSSTLGMVHALLPLMTITLYSVMKKIDPALVKAAANLGAN
RFAAFRAVFLPLSLPGVVNGCTMVFIVSLGFYVMPVLLGSPSEQMMAGLIGQQMEEFGNF
GDASAMAVVLACTTLSLYALYNRFFGLDKLWSKGK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagcttcgcccttatctcctgctggcccccctggccgcgttcctgacggcgttc
tttctcatgccgctcgcccaggtgctctggctgagcttcaccgaaccgacgccgggcttt
gccaactacgtgcacttctttgcggacccgttctatcttcgcgtgttgggcatgacgttc
ctcacgtcgctgctcgtgaccgcgtgctgtctcgtgctgggctacccgcttgcctactgc
ctggcacaggcgacggcgcggttcggcgccggcattctgctcgtcgtcggcatgagttac
tggacgagcttcctcgttcggagctatgcgtggatgatcatcctcggcaacagcggcccg
atcgtcgggctgttccggatgctgggggtgcagacgccgccagagctgctgttcacccgc
ttctcgtccacgctcgggatggtgcacgcgctccttccgctcatgaccatcacgttgtac
tcggtcatgaagaagatcgacccggcgctggtcaaggcggcggccaatctgggggcgaac
cgtttcgcggcgtttcgggcggtgttcctgccgctctcactgcctggcgtcgtcaacggc
tgcacgatggtgttcatcgtctcgctcggcttctatgtcatgccggtactgctgggcagc
ccgagcgagcagatgatggcgggactgatcggacagcagatggaagagttcggcaacttc
ggtgacgcttccgcgatggccgtggtgctcgcatgcacgacgctcagcctgtatgcgctc
tacaaccgattcttcgggctcgacaaactctggagcaaaggcaaatga
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